Populus trichocarpa (black cottonwood): 7465955
Help
Entry
7465955 CDS
T01077
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7465955
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7465955
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
7465955
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
7465955
Ubiquitin system [BR:
pop04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
7465955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
7465955
NCBI-ProteinID:
XP_002308397
UniProt:
B9HB14
LinkDB
All DBs
Position
6:complement(19139700..19148035)
Genome browser
AA seq
950 aa
AA seq
DB search
MEDILISSSETEMRIESGVDIENGYKVDCTLKRSAKFQLATKHYSGFKNSTADFKIETLN
PDNNSRKRPFGFDHHHPGHSGKRVDGSDFVENGLDPELCFGITFRRIGAGLENLGNTCFL
NSVVQCLTYTEPLAAYLQSGKHQNSCHVAGFCALCAIQKHVSRALQSSGRSLVPKDLVSN
LRCISRNFRNARQEDAHEYMVNLLESMHKCCLPSGVPSESPAAYETSLVHKIFGGSLCSQ
VECQQCSYCSNKFDPFLDLSLEIAKADTLPALLRNFTAAEMLDGGEKHYQCQRCKQKVRA
KKWLTVHKAPHVLTIHLKRFHAHDPGRKVDRKVIFDRSLDMKPFVSGSYEGDLKYSLYGV
LVHYGHNTHSGHYVCFVRTSSGIWHLLNDNQVRQVSEKAVLEQKAYMLFYVRDRKTIVPR
KPVDVVHKESMKATFGNNFADLVAKQFSNECVGGGLIGNRLEATDSPAAMNKKDASSVVT
SSEIHPKDTSFQQSSRQTLLKVDSSLETSSAPLSTDPSKLANSHLGECLPPSTASLNSNN
VGPKLENASVITEAKTSDCKEPFSSSSGPQSSAIDKLVTRETSQKINGDQNVGVSSQAPY
EDSCGKTVGEVPRLAPSEGSTDKAFDKSNTVKSPNKPGCESDQGGDIPIESAAWKTPSDK
AGEGGQYIVHQLVEGLIPTAFVPSVIQNECLQSKAPDCLPKKKLKNKRRMHLGTNLFKVS
LGLQKRKKHKKSNCHTSKTSNLIKENLQEQPENDVFSSELGPSTSKISSTVLLASMNSRR
KMAKSGSRKGDNVRNCRDMGVVDVESVERISPSSAVLAMDEQRRKISISISEVNQGDPRE
PDCSENSKRYASQNRMMGVITGGVKETVSPWDGIAMPPQIVESNGVENLSTGYVADEWDE
EYDRGKRKKPRQSMHNFDGPNLLQAFATKKTQVKKAKIDRSRSGNQPFRI
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatattgataagtagtagtgaaacggagatgagaatcgaatcgggtgtggac
attgaaaacggatacaaggtcgattgtactttgaaacgaagtgcaaagtttcagctggcg
actaaacattacagtggtttcaagaacagcactgctgattttaagattgagactttaaat
cctgataataattcgagaaagagacccttcgggtttgaccatcaccatccgggtcattcc
gggaagagagttgacgggtccgattttgtcgaaaatgggcttgatccggagctttgtttt
gggatcactttcaggagaattggtgctggccttgaaaatcttgggaacacttgttttctc
aattcggtggtgcaatgtctgacatacactgagcctttagcagcatatttgcaaagtgga
aagcatcaaaattcatgtcatgttgctggattttgtgccttgtgtgccatccaaaaacat
gtgagccgtgctctacaatcaagtgggaggtcactagtgcccaaggatcttgtctcaaat
ttgcgctgcatatctcggaacttccgaaatgcaagacaggaggatgcgcatgaatatatg
gttaatttgctggaatcaatgcataaatgctgcttaccttcaggagtgccaagcgaatcc
cctgctgcttatgagacaagtttggtacacaaaatctttggtggtagcctttgtagtcag
gtggaatgccaacaatgttcttactgctccaacaaatttgatccatttttagatttaagc
cttgaaatagccaaagcagataccttgccagctttacttcggaatttcactgctgcagag
atgttagatggaggagagaagcattatcaatgccagcgatgcaagcagaaagttagggct
aagaaatggcttacagttcacaaggcaccgcatgtgcttacaatacatctaaaacggttt
catgcacatgatcctggacggaaggttgacaggaaagttatatttgatcgttcattggac
atgaaaccatttgtcagtggttcctatgagggggatttaaagtacagtctatatggtgtt
ctggtacattatggtcacaatacccactctggtcattatgtctgttttgttcggacatca
agtggtatttggcacctcctcaatgacaatcaggttcgtcaagttagtgagaaggctgtt
ttagagcagaaggcttatatgctgttctacgttcgtgatagaaaaactattgttccaaga
aaacctgttgatgttgttcataaagaaagtatgaaagcaaccttcggcaataactttgct
gatctggtcgccaagcaattctcgaacgaatgtgtgggtggtggtttgattgggaataga
ttggaggctactgactctcctgctgctatgaataaaaaagatgcatcaagtgttgttact
tcatcagagatccatccaaaagacacatcatttcagcaaagcagtaggcaaacattgctg
aaagtggattcttctttagaaacttcaagtgcaccattgtcaacagacccatcaaaattg
gcaaattcacaccttggagaatgcttgccaccttcaactgcatctctgaacagcaataat
gttggtcctaaacttgaaaatgcttctgttattactgaggccaaaaccagtgactgtaag
gagccatttagcagcagcagtggcccccaaagttctgctattgacaaacttgtcacaagg
gagacctcacaaaagattaatggtgaccaaaatgtgggggtttcaagccaagctccatat
gaggattcttgtggtaagacagtgggtgaggttccaagattggctccttccgagggatct
actgacaaggcatttgataaatcaaacactgtgaaatcacctaataagccaggctgtgaa
agtgatcagggtggggatatccccattgagagtgctgcttggaaaacacctagtgataag
gctggtgaaggtgggcaatatattgtacatcagttggttgagggtttaatcccaacagca
tttgtcccatctgtcattcaaaatgaatgtttgcagagcaaagctcctgattgcttacct
aaaaagaaattaaagaacaagcgtaggatgcatcttggcacaaacttattcaaggtgtcc
ttgggccttcaaaagaggaaaaagcacaaaaagagcaattgccacacttcgaagaccagt
aatctgattaaagaaaacttgcaggagcagccggagaatgatgttttttcatcagaattg
gggccatctacatccaaaatctcatctacagttttattggcgtcaatgaattctcggagg
aagatggctaaatctggttcaagaaagggagataatgtaagaaactgccgtgatatgggt
gtggtagatgtagaatctgtggagagaattagtccaagcagtgcagtgcttgcaatggat
gagcagagacgaaagatctctatctcaatctctgaagtaaaccaaggagatccaagagaa
cctgactgctcagaaaatagcaaaagatatgcatcacagaacaggatgatgggggtaatt
actgggggtgtgaaggagactgtttcaccttgggatggaatagcaatgccacctcagatt
gtggaatccaatggggtagaaaatctcagcactggttatgtagcagatgagtgggacgaa
gaatatgaccgaggtaagagaaagaagccaaggcaatctatgcacaactttgacgggcca
aaccttttgcaagcattcgcgacgaagaaaacccaagttaagaaggccaagatagaccga
tctaggtctggaaaccagcccttcaggatatga
DBGET
integrated database retrieval system
