KEGG   Populus trichocarpa (black cottonwood): 7465965
Entry
7465965           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7465965
  KO
K13431  signal recognition particle receptor subunit alpha
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03060  Protein export
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    7465965
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pop02044]
    7465965
Secretion system [BR:pop02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   7465965
SSDB
Motif
Pfam: SRP-alpha_N SRP54 SRP54_N AAA_22 AAA_17 AAA_16 MMR_HSR1 TPP_enzyme_M AAA_19 DUF5693 AAA_30 MeaB nSTAND3 Zeta_toxin AAA_33
Other DBs
NCBI-GeneID: 7465965
NCBI-ProteinID: XP_002309350
UniProt: B9HB30
LinkDB
Position
6:18987347..18991579
AA seq 624 aa
MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGTASYNYDAPGASYTLK
WTFHNDLGLVFVAVYQRILHLLYVDELLAMVKHEFSQIYDPKRVEYFDFDETFRQLRKEA
EARAEELRKVKPVGKGVNDGRKLVMKKGSGFGGGNKKNKSEANEGGNGDDGKGRKLENGH
SNGNHNAVVVEGNRGMGLANGKENASSNNEAFDVTKLQKLKSKGGKKTSDTSVVSKGSNV
DPKKKVTKKNRVWDDSPKDAKLDFTDHVEGNGNENIEVVAADQGESMMDKEEIVSSDSED
EEDEEVSKDSKPDAKKKGWFSSMFQSIAGKANLEKADLEPALKALKDRLMTKNVAEEIAE
KLCESVAASLEGKKLSSFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAATEQRKPYV
VVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKG
YEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEA
LVGNDAVDQLSKFNQKLADLSTSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMF
VGCGQSYTDLKKLNVKAIVKTLLK
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgttagagcagttgttaatatttactagaggaggtctgattttatggacatgtaaagag
ctcggaaatgcattaaagggatcgcccattgatactttgattcgatcttgtctgttggaa
gaacgatccggtacagcatcctacaattacgatgcccctggcgcctcttacacccttaaa
tggactttccataacgaccttggcctcgtttttgtcgctgtgtatcagcgaattcttcat
ttgttgtacgtggatgagttgttggcgatggtcaagcatgagttttcccagatttatgat
cccaaacgtgtggagtattttgattttgatgagacttttaggcagcttaggaaggaagcg
gaggcaagggcagaagagttgaggaaagtgaagcctgtggggaagggcgtgaatgatggg
aggaagctggtgatgaaaaagggtagtgggtttggtggagggaataaaaaaaataagagt
gaggcgaatgagggtggtaatggtgatgatgggaaagggaggaaattggagaatggacac
tccaatgggaatcataatgctgttgttgttgaaggtaatagagggatgggtctcgcgaat
ggtaaagaaaatgcgagttccaataatgaggcttttgatgtcactaaacttcagaagctg
aaaagtaaaggtgggaaaaaaacttctgatactagtgttgttagcaagggttccaacgtg
gacccaaagaaaaaggtaacaaagaagaatagagtttgggatgattcacctaaagatgcg
aaattggattttacggatcatgtggaggggaatgggaatgagaatatagaagttgtggca
gctgatcaaggtgaaagcatgatggacaaagaagagattgtcagcagtgacagcgaagat
gaagaagatgaggaagtcagtaaggacagcaagcctgatgctaagaagaagggatggttt
tcatccatgttccagagtattgctggtaaggcaaacctggagaaggcagacctggagcca
gcattgaaagctctcaaggataggctcatgaccaagaatgtggctgaggagatagcagag
aagctttgtgaatcagttgcagctagtcttgaaggtaaaaagctgtcatctttcacaagg
atatcttcaacagtgcaggcagctatggaagaagcacttgttcgtattttaactcctagg
cgttctatcgacatattaagagatgtacatgctgcaacggaacagaggaaaccatatgtt
gttgtttttgttggtgtcaatggggttggaaagtccacaaatctggctaaggttgcatac
tggcttctgcaacataaggtcagtgttatgatggctgcttgtgatacatttaggtcagga
gctgttgagcagctgaggactcatgcacgcagacttcagatccctatatttgaaaagggc
tatgagaaagatccagcggttgtggcaaaggaagcaattcaggaggccacacgcaatggt
tctgatgttgttcttgttgatactgctggtcgaatgcaggacaatgaaccattaatgaga
gctctctcaaagctaatttacctcaacaatcctgatctggtcttgtttgttggagaggcc
ttggttggaaatgatgctgttgatcagctatcaaagttcaatcagaaattagccgacctg
tctacttcacccaatcctagattaattgatgggattttgctcaccaagtttgacaccatt
gatgacaaggttggagctgcattgtcgatggtatacatctccggctcaccggtcatgttt
gttggctgtggtcaatcttacacagatctcaagaagctgaatgtgaaagctattgtcaag
acactccttaaatga

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