Populus trichocarpa (black cottonwood): 7466004
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Entry
7466004 CDS
T01077
Name
(RefSeq) transcription factor E2FA isoform X1
KO
K06620
transcription factor E2F3
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7466004
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
7466004
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Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
SKA1
TrmB
Leu_zip
ZapB
Spc24
APG6_N
Motif
Other DBs
NCBI-GeneID:
7466004
NCBI-ProteinID:
XP_002308444
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Position
6:21339591..21345192
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AA seq
457 aa
AA seq
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MSGGAKASTRPAAAPPPSGPIQPPLTRQLAFATMKPSFVPPDDYHRFSSPSTSRVTADRD
AEAIVVRSPQLKRKSALDDNGVGPSNRASSPGSTSISNISLRTPVSAKGGRTYNKSKASK
GSGAGPQTPVSKADCASPLTPAGSCRYDSSLGLLTKRFVDLFKHADDGILDLNNAAETLE
VQKRRIYDITNVLEGIGLIEKTLKNRIRWKGIDASRPGQVEGDATLLQAEIAKLTMEEHA
LDDQIREMQERLRDLSEDENNQKRLFVTEEDIKSLPCFLNETLIAIKAPHGTTLEVPDPD
EAVDYPQRRYRIILRSSMGPIDVYLVSQFEENFEEMNNVEASVSIPLASISASHGNPMTE
MTTDVRTQGRSGSLAQQAQTMFSDPNTTQELGGMMKIVPSDIHDDSDYWLLSDAGISITD
MWKTDSNIEWADFGVTDVQTPRTQTPLHGITEVPPGV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggcgctaaagcctcaaccagaccggctgcggcgccgcctccatcaggaccg
atccagcctcctttaacgcggcagcttgcatttgctacgatgaagccatcgtttgttcct
cctgatgattatcaccgattttcttcaccgagtactagtagagtcaccgccgaccgggat
gccgaggctattgttgtgagatctcctcaattaaaacggaagagtgcattggatgataat
ggagttggccccagcaatcgtgctagcagtcctggatccactagcatatctaatatttcc
ttaaggacacctgtatcagcaaaaggaggaaggacatacaacaaatccaaggcctcaaag
ggcagtggagcaggacctcaaaccccggtgtcaaaggctgattgtgcttctcctcttact
ccagctggcagctgtcgttatgatagttcccttggtcttttgacaaaaaggtttgtcgat
ctatttaaacatgctgatgatggaattcttgacctaaacaacgcagccgaaaccttggag
gtacaaaagagacggatatacgacataacaaatgtcttggaaggaattggtctcatagaa
aaaacactcaagaacagaatacgttggaagggtattgatgcttcaaggccagggcaggta
gaaggtgatgcaactttgttacaggcagaaattgcaaagcttactatggaagagcacgca
ctagatgatcaaataagagaaatgcaggaacgattgagagatctgagtgaggatgagaac
aatcagaagaggctttttgtgactgaagaagatatcaagagtctgccttgtttcctgaat
gaaaccctcatagcaattaaagctccccatggaactactctagaagtccctgatcctgat
gaggctgttgactatccacaaaggagatacaggataatccttagaagctctatgggtcct
attgatgtctaccttgtgagtcaattcgaggagaattttgaggagatgaataacgttgag
gcatctgtgagcattccacttgcttctatttcagcatcccatggaaacccaatgacagag
atgaccactgatgtgagaacccagggaagaagtggatctctggcacaacaggcacaaact
atgttctctgatcctaatactactcaggagttagggggaatgatgaagattgttccttct
gatatacatgatgattcagattactggcttctttcagacgcaggcataagtattacagat
atgtggaagacagactcaaatattgaatgggctgattttggggtgaccgatgtccaaact
cccaggacacaaactccattgcatgggattactgaagtgcctcctggtgtttaa
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