KEGG   Populus trichocarpa (black cottonwood): 7466264
Entry
7466264           CDS       T01077                                 
Name
(RefSeq) LEC14B protein isoform X1
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    7466264
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     7466264
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_SCAP Cytochrom_D1 Beta-prop_IFT140_1st WDR54 HI0933_like
Other DBs
NCBI-GeneID: 7466264
NCBI-ProteinID: XP_024441080
LinkDB
Position
14:9222820..9230274
AA seq 488 aa
MYFFARRTSVDEMGYAMSRLETESELCDGGKTIPEAGSSKRASNWLNNLDHEIAQVTKLK
SSPHKQLAELVPGMHKSSVSTVKMLVGREANYSARGRFSAADRCHMLSRYLPVNGPWLVD
QMSTRAYVSQFSADGSLFVAGFQGSYIRIYNVEKGWKVQKNILAKSLRWTVTDTSLSPDQ
RHLVYASMSPIVHIVDAGSAETESLANVTEFHDGLDFSSGDGGYSFGIFSVKFSTDGREL
VAGSNDDSIYVYDLEQNKLSLRILAHTSDVNTVCFADESGHLIFSGSDDNLCKVWDRRCF
IAKGKPAGVLTGHLEGITFIDSHGDGRYFISNGKDQTIKLWDIRKMAPNATSYSGLRNYE
WDYRWMDYPYEARDLKHPCDQSVATYKGHSVLRTLIRCYFSPVYSTGQKYIYTGSHDSCV
YIYDLVTGELVSLLQHHKSPVRDCSWHPYYPMLVSSSWDGDVVKWEFPGNGEAPVPSTKK
RIRRRQFD
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgtatttttttgctagaagaacttcggtagacgaaatgggttacgctatgagcagactg
gagactgaatctgaactctgtgatggtggcaagaccattcctgaggctggtagcagcaag
agagccagcaattggttgaataacttagaccatgaaattgctcaggttacgaagttgaaa
tctagtccgcataaacagctggccgaacttgttcccggcatgcataagtcatctgtttcc
actgttaagatgttggttggtcgagaagctaattattcagcaaggggaagattctctgca
gctgatcgttgtcacatgcttagcagatatttgcctgtcaatggaccttggcttgttgac
cagatgagtacccgagcctatgtctcgcagttttcagctgatggctctctatttgttgct
gggtttcagggaagctatattagaatatacaatgtggagaaggggtggaaagttcagaag
aacattcttgccaaaagtttgcgttggactgttaccgatacatctctttccccagatcag
cgccatctcgtttatgcaagcatgtcacctattgtccatattgttgatgctgggtctgcc
gaaacagagtcgcttgcaaacgttacggagtttcatgacggattggacttttcttctggt
gatgggggctattcttttggaatcttctctgtgaaattttccactgatgggcgagaactt
gttgcaggaagtaatgatgactccatatatgtctacgaccttgaacaaaataagctctcc
ctcagaattttggcacacacgtctgatgttaacactgtatgttttgctgatgaaagtggc
caccttatcttttctgggagtgatgataatctttgcaaggtgtgggatagacgctgcttt
attgcaaaagggaagccagctggagtcctaacaggacacttagaaggcataacatttatt
gacagccatggagatggtcggtattttatctcaaatggtaaagatcagactatcaaactt
tgggatattcggaaaatggcccctaatgctactagctattcagggcttaggaattatgaa
tgggactacaggtggatggactacccatatgaggcaagagatttgaaacacccctgcgat
caatcagtagccacatataaaggtcattcggttctgcgcactcttatccgctgctacttt
tctcctgtatatagtactggccagaagtacatctacactggatctcatgattcttgtgtt
tatatttatgacttggtgactggagaactagtttcattactacaacatcataaatcacct
gtaagagattgtagttggcacccatattatcccatgctcgtcagctcttcttgggacgga
gatgtcgtaaaatgggagtttcctggcaatggagaagctccagtcccttcaaccaagaag
agaattcgaaggagacaatttgattga

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