Populus trichocarpa (black cottonwood): 7466264
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Entry
7466264 CDS
T01077
Name
(RefSeq) LEC14B protein isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7466264
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
7466264
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Cytochrom_D1
Beta-prop_IFT140_1st
WDR54
HI0933_like
Motif
Other DBs
NCBI-GeneID:
7466264
NCBI-ProteinID:
XP_024441080
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Position
14:9222820..9230274
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AA seq
488 aa
AA seq
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MYFFARRTSVDEMGYAMSRLETESELCDGGKTIPEAGSSKRASNWLNNLDHEIAQVTKLK
SSPHKQLAELVPGMHKSSVSTVKMLVGREANYSARGRFSAADRCHMLSRYLPVNGPWLVD
QMSTRAYVSQFSADGSLFVAGFQGSYIRIYNVEKGWKVQKNILAKSLRWTVTDTSLSPDQ
RHLVYASMSPIVHIVDAGSAETESLANVTEFHDGLDFSSGDGGYSFGIFSVKFSTDGREL
VAGSNDDSIYVYDLEQNKLSLRILAHTSDVNTVCFADESGHLIFSGSDDNLCKVWDRRCF
IAKGKPAGVLTGHLEGITFIDSHGDGRYFISNGKDQTIKLWDIRKMAPNATSYSGLRNYE
WDYRWMDYPYEARDLKHPCDQSVATYKGHSVLRTLIRCYFSPVYSTGQKYIYTGSHDSCV
YIYDLVTGELVSLLQHHKSPVRDCSWHPYYPMLVSSSWDGDVVKWEFPGNGEAPVPSTKK
RIRRRQFD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtatttttttgctagaagaacttcggtagacgaaatgggttacgctatgagcagactg
gagactgaatctgaactctgtgatggtggcaagaccattcctgaggctggtagcagcaag
agagccagcaattggttgaataacttagaccatgaaattgctcaggttacgaagttgaaa
tctagtccgcataaacagctggccgaacttgttcccggcatgcataagtcatctgtttcc
actgttaagatgttggttggtcgagaagctaattattcagcaaggggaagattctctgca
gctgatcgttgtcacatgcttagcagatatttgcctgtcaatggaccttggcttgttgac
cagatgagtacccgagcctatgtctcgcagttttcagctgatggctctctatttgttgct
gggtttcagggaagctatattagaatatacaatgtggagaaggggtggaaagttcagaag
aacattcttgccaaaagtttgcgttggactgttaccgatacatctctttccccagatcag
cgccatctcgtttatgcaagcatgtcacctattgtccatattgttgatgctgggtctgcc
gaaacagagtcgcttgcaaacgttacggagtttcatgacggattggacttttcttctggt
gatgggggctattcttttggaatcttctctgtgaaattttccactgatgggcgagaactt
gttgcaggaagtaatgatgactccatatatgtctacgaccttgaacaaaataagctctcc
ctcagaattttggcacacacgtctgatgttaacactgtatgttttgctgatgaaagtggc
caccttatcttttctgggagtgatgataatctttgcaaggtgtgggatagacgctgcttt
attgcaaaagggaagccagctggagtcctaacaggacacttagaaggcataacatttatt
gacagccatggagatggtcggtattttatctcaaatggtaaagatcagactatcaaactt
tgggatattcggaaaatggcccctaatgctactagctattcagggcttaggaattatgaa
tgggactacaggtggatggactacccatatgaggcaagagatttgaaacacccctgcgat
caatcagtagccacatataaaggtcattcggttctgcgcactcttatccgctgctacttt
tctcctgtatatagtactggccagaagtacatctacactggatctcatgattcttgtgtt
tatatttatgacttggtgactggagaactagtttcattactacaacatcataaatcacct
gtaagagattgtagttggcacccatattatcccatgctcgtcagctcttcttgggacgga
gatgtcgtaaaatgggagtttcctggcaatggagaagctccagtcccttcaaccaagaag
agaattcgaaggagacaatttgattga
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