Populus trichocarpa (black cottonwood): 7466291
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Entry
7466291 CDS
T01077
Name
(RefSeq) heat stress transcription factor A-4b isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7466291
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7466291
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
FPP
DUF4164
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
7466291
NCBI-ProteinID:
XP_002321069
UniProt:
B9IA41
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Position
14:complement(9605622..9608393)
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AA seq
443 aa
AA seq
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MDGSQSNSSNAPPPFLTKTYDMVDDPLTNSVVSWSHSGCSFVVWNPPEFAQDLLPKYFKH
NNFSSFVRQLNTYGFRKIDPDQWEFGNEEFIRGQRHILKNIHRRKPVHSHSMQNHGIISP
LAETEKQEYEKEINRLKHDKNELELELQRNEAEKQGFEFQIVSLGERLQSMECRQKQLMS
FLGQLMRKPEFASLLMQQSEYHNKKRKLLKLDYFQGDYKEENENLCSPIANLDGLPAPML
HPESVEKLDSSLKFLEDFLYAVGESFSEEVCHVGVRSQPSMVIVRELSSSSADGEPWSPR
SFPSSPHSRDIRSSPELARCINNVVRQTTPSYLGDDTMPESSQLQANCKHSRAPASEVIK
APALEMKSPTVVNGANDLFWQHFLTEAPGPHDGQESEGRTERRITDDIRSNTKPDSHERS
WWNTNYIDNLAKNMGHIATAERS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggatggttcacagagtaacagttcaaatgcaccaccgccttttctaaccaaaacatat
gacatggtggatgatcccttgactaactcggtggtgtcatggagccacagtggttgcagt
tttgtggtgtggaatccacctgaatttgctcaggatttgcttcccaagtacttcaagcac
aataacttctccagttttgtcaggcagcttaatacttatggatttaggaagattgatcct
gatcagtgggagtttggtaacgaagaatttataagagggcagagacatattctaaagaat
attcaccggcggaagccagttcatagccattccatgcagaatcatgggattatctctccg
cttgctgaaacagaaaaacaggaatatgagaaggaaattaaccgactgaaacatgataag
aacgaacttgagttggagctacagagaaacgaggcagagaagcagggatttgaatttcaa
atcgtctcactgggtgagcgcttacagagtatggaatgcagacagaagcagttgatgtcc
ttcctgggtcagctaatgcgaaaaccagagtttgcctctcttctcatgcagcagtctgaa
tatcataacaaaaagagaaagctactgaaacttgattacttccagggcgattacaaagag
gagaatgagaatttgtgttctccaattgcaaacctggatggattgcctgctccaatgctg
catccggagtcggttgagaagttggattcatcattaaaattcttggaagattttctctat
gctgttggtgaaagttttagtgaagaagtgtgccatgttggtgtcagatcacaaccttca
atggtcattgttagagaattaagttcatcctctgcagatggcgagccttggtctccaaga
tcatttccatcttcaccacattcgagggatattcgttcatcacctgagctggctagatgt
atcaataatgttgtcagacaaacaactccaagttatctcggtgatgatacgatgcctgaa
tcttcacagttacaggcaaattgcaagcattctagagctccagcatctgaagtcataaaa
gcaccagcattagagatgaaaagtcctactgtggtgaatggagcaaatgatcttttctgg
caacacttcctgactgaggcccccggtccgcatgatggacaagaatctgaaggtcgaaca
gaaagaaggattacagatgacataagaagcaataccaagccggacagtcacgagagatct
tggtggaatacgaactacatagataatcttgcaaaaaatatgggacacattgcgacagct
gaaagatcatga
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