Populus trichocarpa (black cottonwood): 7466425
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Entry
7466425 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7466425
KO
K14574
ribosome maturation protein SDO1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
7466425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7466425
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
7466425
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
zf-C2H2_jaz
zf-C2HE
DUF5677
Motif
Other DBs
NCBI-GeneID:
7466425
NCBI-ProteinID:
XP_002302200
UniProt:
B9GTN9
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Position
2:complement(5146638..5149384)
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AA seq
356 aa
AA seq
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MSVKLLQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS
NVSKGVLAKNSDLVKAFGHDDHTKICLEILEKGELQVAGKERDSQLSSQFRDIATIVMQK
TINPETQRPYTISMVERLMHEIHFAVDPHSSSKKQALDVIRELQKHFPIKRSPMRLRLAV
IGQKFPNLLEKLNAWDANVVSKDESGSHQSVICEMDPGFFRDCDALVRNLQGRMEILAVS
VHFEGDTHVDDFDDYEDVPPALPKESADSEVQLSEKIQKQTISEEKKADTLAKQNKCSTC
NAFVGDAKQFRDHFKSDWHKHNLKRKTKQLPPLTAEECLADMDLNDSKADLKEYSF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaagttgctgcagccggtagggcaaaaacggttgacgaacgtagcagtggtt
cgattaaagaagcatggtatgcgtttcgagattgcttgttacaagaacaaggtcctctct
tggcgctctggcgtagagaaagatttggatgaagtgttgcagtcccacacagtttattca
aatgtttcaaaaggagttcttgcaaagaattcagatttggttaaagcttttggacacgat
gatcataccaagatctgcctagagatattggagaaaggggagcttcaagtggctgggaaa
gagagggattctcagttgtctagtcagtttcgggatatagcaactattgttatgcagaaa
actattaatcccgagacgcaacgtccttacactatcagtatggttgagagattgatgcat
gaaattcactttgctgttgacccgcatagcagctctaagaagcaggcgctagatgttatt
cgtgagcttcaaaagcattttccaatcaaacggtctccaatgagacttcggcttgctgtt
attggacagaagtttcctaatctattggaaaagctcaatgcctgggatgctaacgttgtt
tctaaagatgaatctggaagccatcaatctgttatttgtgaaatggacccaggtttcttc
agggactgtgatgccttagtgaggaatctgcagggcaggatggaaattcttgcagtgtct
gttcattttgagggggacacccatgtagatgactttgatgattatgaagatgtgccacca
gccctacccaaggagtctgctgattctgaagtacaactgagtgagaaaatccaaaaacag
accatctctgaggagaagaaggctgacacgctggcaaagcaaaacaagtgcagcacatgc
aatgcatttgttggggatgcaaagcagttcagggatcacttcaagagtgactggcacaaa
cataatttgaagcgcaagaccaagcagctcccaccgctcactgcagaagagtgtttggct
gacatggacctgaatgactctaaagcagatttaaaagaatactcgttttga
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