Populus trichocarpa (black cottonwood): 7466443
Help
Entry
7466443 CDS
T01077
Name
(RefSeq) agamous-like MADS-box protein MADS9
KO
K09264
MADS-box transcription factor, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7466443
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
7466443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
HALZ
Hemagglutinin
bZIP_1
Motif
Other DBs
NCBI-GeneID:
7466443
NCBI-ProteinID:
XP_002300964
UniProt:
B9GU03
LinkDB
All DBs
Position
2:5530272..5532979
Genome browser
AA seq
211 aa
AA seq
DB search
MGRGKIEIKRIENSSNRQVTYSKRRSGIIKKAKEITVLCDAQVSLVIFASSGRMHEYCSP
STTVVDLLDKYHKQSGKRLWDAKHENLSNEIDRIKKENESMQIELRHLKGQDISSLPHKE
LMAIEEALDTGLAAVRKKQMEFHSMLEQNEKILDEEFKHLQFVLQQQEMAMEENAMEMEN
AYHQQRVRDYNSQVPLAFRVQPIQPNLQERM
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggtaagattgagatcaagaggattgaaaactcaagcaacaggcaagtgacc
tactctaagaggagaagtgggatcataaaaaaagctaaggagatcacagttttatgcgat
gctcaagtttctcttgtcatctttgctagttctggaaggatgcatgagtactgcagccct
tccactacggtggtcgatctgttggacaagtatcacaagcaatctggtaagaggctgtgg
gatgctaaacatgagaacctcagcaacgagattgacagaatcaagaaagagaatgaaagc
atgcagattgagctgaggcatctgaaagggcaggatatctcatctttgccccacaaagag
ttgatggccatagaggaagcccttgatactggccttgctgctgtccgtaaaaagcagatg
gagttccacagcatgttggagcaaaatgaaaagatattggatgaggagttcaagcacctc
cagttcgttctgcaacaacaagagatggccatggaagagaatgcgatggagatggaaaat
gcttatcatcaacaaagggtgagagactataattcccaggtgcctctcgcattccgcgtg
cagccgatccagccaaatttgcaagagaggatgtaa
DBGET
integrated database retrieval system
