Populus trichocarpa (black cottonwood): 7467101
Help
Entry
7467101 CDS
T01077
Name
(RefSeq) high mobility group B protein 13
KO
K09273
upstream-binding transcription factor
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7467101
03021 Transcription machinery [BR:
pop03021
]
7467101
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
7467101
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
7467101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
7467101
NCBI-ProteinID:
XP_002299486
UniProt:
B9GL80
LinkDB
All DBs
Position
1:complement(7415921..7418551)
Genome browser
AA seq
498 aa
AA seq
DB search
MADTAVAPTVPKKSRNNRKALKQKNPSTNEANIMAQKLPEPSPASVLPPSDTDSSKENLE
SLSQPRSSPKKGKSKAAKAKQNKEAAASSFEKDFQEMQEMLQQLKLEKEKTEVLLKEKDE
MLKAKDEEIEMKGKEQEKMKTELKKLQKLKEFKPIMTLPFVQVLNEKEQDKKKKKGGNEI
KRPCPPYSLWCKDQWNEVKKENPDAEFKDISHILGAKWKTITAEEKKPYEEKYQVEKEAY
LKLMTKEKRESEAMKLLEEEQKQKTAMELLEQYLQFKQEAGQEENKKNKTKKEKDPLKPK
HPLSAFFLFSNERRAALLAENKNVLEVAKIAGEEWKNMTEKQKRPYEEIAKKNKEKYTQE
MEAYKQNKDEEAMNLKKEGEELMKLQKQEALQLLKKKEKTENIIKKTKEQRQKKQQQNAD
PNKPKKPASSFLLFSKETRKSLVHEHPGINSSTLTAMISVKWKELIQEEKQIWNCKAAEA
MEAYKKELEEYHKSVAAT
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggctgatactgctgtagccccaacagttccaaagaaatcaagaaacaacaggaaagct
ttgaaacaaaagaacccatcaacaaatgaagccaatataatggctcaaaagctccccgag
ccatctccagccagcgttttgcccccatcagatactgactcttcaaaagaaaaccttgag
agtctttctcaacctcggtcttcacccaagaaagggaagtccaaggccgcgaaagcgaag
cagaacaaagaggctgcggcttcttcttttgagaaggattttcaagaaatgcaagaaatg
ttgcagcagttgaagcttgagaaagagaagactgaggtgttgttgaaggagaaagatgag
atgttgaaggctaaagatgaggagattgaaatgaagggtaaagaacaggagaaaatgaag
acggagttgaagaagttgcagaagttgaaggagtttaagcctatcatgactctcccattc
gttcaagtattgaatgaaaaggagcaagacaagaagaaaaagaagggtggcaatgaaatc
aaaaggccatgcccaccttactccctctggtgcaaagatcaatggaatgaggtcaagaaa
gaaaacccagatgcagagttcaaagatatctctcacattttgggggcaaagtggaagacc
attactgcagaggagaagaaaccttatgaggagaagtatcaggttgaaaaagaagcctat
ctgaagttgatgacaaaggagaagcgcgagagtgaagcaatgaagcttttggaagaggaa
cagaagcagaagactgctatggaattgcttgaacaatacctccagttcaagcaggaagca
ggtcaggaagagaacaagaagaacaagaccaagaaagaaaaggatccattgaaaccaaag
catccattgtctgcatttttcttgttttctaatgaaagaagagctgctctgcttgcagag
aacaagaatgttctggaggtggcaaagattgctggtgaagaatggaagaacatgacagaa
aagcaaaagaggccttacgaagagattgcaaagaagaacaaggaaaagtacacgcaagaa
atggaggcttacaagcagaacaaggatgaagaagctatgaatctcaagaaagaaggggaa
gaactgatgaaacttcagaaacaggaagcattgcagttgctaaagaagaaagagaaaact
gaaaacattatcaagaaaaccaaagagcaacgccagaagaagcagcagcagaatgctgat
cccaacaagcctaagaagcctgcatcttcattccttctgttcagcaaagaaacaaggaaa
agtttagtgcatgagcaccctggaattaacagttccactctaactgcaatgatttctgtg
aaatggaaggaacttattcaagaagagaagcaaatctggaactgcaaggctgctgaagcc
atggaagcatacaagaaggaattggaggagtaccacaaatctgttgctgcaacttag
DBGET
integrated database retrieval system