Populus trichocarpa (black cottonwood): 7467201
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Entry
7467201 CDS
T01077
Name
(RefSeq) mechanosensitive ion channel protein 3, chloroplastic isoform X1
KO
K22047
mechanosensitive ion channel protein 1/2/3
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7467201
Transporters [BR:
pop02000
]
Other transporters
Pores ion channels [TC:
1
]
7467201
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GFIT
Motif
Pfam:
Msl2-3_C
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-GeneID:
7467201
NCBI-ProteinID:
XP_024452021
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Position
2:complement(7818331..7824803)
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AA seq
711 aa
AA seq
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MTSASSMKLSHELRVHNCHGCNNQYTSASRVQLVNANLSSQFLRLDPWGLHFLNSTRGPP
SPVPSRCNVFLCRSVLTPGGGNEIPVLKSAALAFTRSYDALRGSNLVLKLIPAIGIITFA
AWGLGPLIWLGRTIFLHKSDNSWKKSSTHYVMTSYLQPLLLWTGATLICRALDPVVLQSE
VSQAVKQRLLNFVRSLSTVVAFAYCLSSLIQQAQKFITETNESSDARNMGFSFAGKAVYT
AVWIAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFVLNEW
IQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFSVSIVRNLSQKTHWRIKTHL
AISHLDVKKINNIVADMRKVLAKNPQIEQQRLHRRVFLDNINPENQALMILVSCFVKTSH
FEEYLCVKEAVLLDLLRVISHHCARLATPIRTVQKIYSEADLENVPFSDSIFTRSGATAN
HPLLLIEPSYKINSEDKVKASNRSLRANEEKDAKVEAALVSELKADAKAGSMPVVDSKRD
KVVAKSTSNSSTNSKVSDVSASDPQLISSTPDNSVKNSPGAQQSNGNMGDRWQETLGPNS
ECITSNGATPEGSSVSNTESVGERTESPDISQSKQDIERSVASPLMTRPLLEENIVLGVA
LEGSKRTLPIEEIEEEMDSSPFPLESKELAASQNAGQSPSGKDKKDSRDSS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgctagttctatgaaattgtctcatgaactaagggttcacaattgtcatgga
tgcaataatcaatatactagtgcgagcagagtgcagctggttaatgccaatctctcttct
caattcttgcgactggatccttggggtcttcattttctaaacagcacacgtgggccaccg
agtcctgtaccttccagatgtaatgtgttcctctgccgatctgttctaactccaggtgga
gggaatgagattcctgttctgaaatctgcagcattggcctttacaaggtcctatgatgct
cttcgtggaagtaatctggtgcttaaattgatcccagctattggtatcattacctttgct
gcatggggacttggcccactcatatggttgggaaggactatttttctccataaatctgat
aatagttggaaaaagagtagcacacattatgttatgacctcttatcttcaacctttgctg
ctatggactggagcaacactcatctgcagagcattagatccagtagttctacaatcagaa
gtgagccaggctgtgaaacaacgacttctgaattttgttcgttcattatcaaccgtggtg
gcatttgcctattgtttgtccagcttgattcaacaggcacaaaaattcatcacagagaca
aatgaatccagtgatgcgagaaatatgggctttagttttgctggaaaagctgtttatact
gcagtctggattgctgctgtatctctgttcatggaattgctgggtttctccacacaaaag
tggctcacagctggaggacttggtacagtgttgctcacgcttgctggtcgagagatattt
acgaatttcctttcaagtataatgatccatgctacacggccatttgttttgaatgaatgg
attcagacaaaaattgaaggttatgaagtttctggtactgttgagcatgtgggctggtgg
tcaccaacaattataagaggcgatgatcgtgaagctgttcacattccgaaccacaagttc
agtgtgagtattgtgagaaatcttagccagaagactcattggcgcatcaagacccacctt
gccatcagtcacttggatgtcaaaaaaattaataatattgtagctgatatgcgcaaagtt
ttggccaaaaatccgcaaattgagcagcaaaggttgcacagaagagttttcctggataat
atcaatccagagaatcaagctcttatgattttggtttcatgctttgtgaaaacctcacat
tttgaagagtacctgtgcgtaaaggaagcagtcctcttggatcttcttagagttatcagc
catcattgtgctcggcttgccacgcccattcgtacagtacagaaaatatacagtgaggct
gatttggagaatgtgccattttctgactccattttcacacgttctggagccactgctaac
catccattattgctgatcgagccctcttataaaattaacagtgaagataaagttaaagct
tcaaatcgttcacttcgtgctaatgaggaaaaagatgcaaaggttgaagcagccctggta
tctgagttgaaagcagatgccaaggctggatcaatgccagttgttgattcaaaacgagat
aaggtcgttgcaaaatctacctccaactccagcacaaattctaaggtctcagatgtgtcg
gcatctgatcctcaacttatcagttcaacgcctgacaattcagttaagaacagtcctgga
gcacagcagtctaatggaaatatgggggatagatggcaggagacattgggaccgaattct
gaatgcataacctctaatggagcaacgcctgaggggtcctcagtttctaacacagaatct
gtcggtgaaagaactgagagtcctgacatttcacagagtaagcaggatattgagagatct
gttgcatcaccattaatgaccagacctttattggaggagaacattgttcttggtgttgct
ttggagggctcaaaacgaactcttccaattgaggaaattgaggaagaaatggattcatct
cctttccctttagaatcgaaggaattggctgccagccagaatgcaggacaatctccttct
ggcaaggataagaaagacagtcgtgacagttcctag
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