Populus trichocarpa (black cottonwood): 7467369
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Entry
7467369 CDS
T01077
Name
(RefSeq) nuclear transcription factor Y subunit A-1 isoform X1
KO
K08064
nuclear transcription factor Y, alpha
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7467369
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
7467369
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
DUF4924
Motif
Other DBs
NCBI-GeneID:
7467369
NCBI-ProteinID:
XP_024464100
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All DBs
Position
9:complement(5737939..5742885)
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AA seq
347 aa
AA seq
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MQSKPEKTNVPEPDPSDIQEYTVHSEPWWRNIGYSSMPPAMTGGNASNSEGHNGSESNDD
QSLSSGRLNEEDADATKDSQATASSQLGNHGHLQNLQGLVSSMTTMHNGLSQSPQFELVS
HSIACASNPYQDAYYSGMMAYGHQPLGYPQFVGMPHARMLLPLEVAQDPVFVNAKQYPGI
IRRREQRAKAEVDKKLIKARKPYLHESRHRHAMRRERSSGGRFAKKTGDDASKNTSEGKL
NGSGPVHASQSRSSSGSELLPSDSVETWNSSEGQKEARESQVHDTFEAHDYVNRGGHYQK
HSGLQSSAYGSYLGDNEDGDRSGENEDEDCPGQQLGNQAKRRFFGPQ
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaagcctgaaaaaactaatgtgccagaacccgatccgagtgacattcaagaa
tatacagttcactctgaaccttggtggcgcaatataggttatagctccatgcctcctgcc
atgaccggtggaaatgcatccaactcagaaggacataatggttctgaatcaaatgatgat
cagtctctgtcgagtggtagactgaatgaggaggatgctgatgctaccaaagattcccaa
gccactgcatcatcccaattagggaatcatggacatttgcaaaatcttcagggtcttgtc
tctagtatgactacaatgcacaatggcctctcacaatctccacagtttgagcttgttagt
cactctattgcatgtgcatcaaacccataccaggatgcttattatagtggaatgatggct
tatggacatcagcctttgggttatccgcaatttgttggaatgccacatgccagaatgctt
ttgccccttgaggtggctcaggatcctgtttttgtaaatgccaaacaatacccagggatt
attaggcgaagagaacaacgtgcaaaagcagaggttgacaagaagctgataaaagctaga
aagccatatcttcatgaatctcggcaccggcatgctatgagaagggaaaggagttctgga
ggacgttttgcgaagaaaactggtgatgatgcttcaaagaacacatccgaaggcaagctc
aatggttctggtccggtccatgcatctcagtcacggagttcatcaggttctgaactcttg
ccctctgactctgttgaaacttggaattcctctgaaggtcaaaaggaagcaagagagtcc
caagtgcatgacacttttgaagctcatgactatgtaaatagaggtggccactatcaaaaa
cacagtggcttgcaatcctctgcatatggctcttacctgggtgacaatgaggatggagac
cgttcaggtgaaaatgaggacgaagactgtccaggccagcaactggggaaccaggccaaa
cgaaggttttttggcccacagtga
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