Populus trichocarpa (black cottonwood): 7467391
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Entry
7467391 CDS
T01077
Name
(RefSeq) DDT domain-containing protein PTM
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
Chromo_PTM
DDT
PTM_DIR17_Tudor
PHD
PHD_2
WHIM1
Motif
Other DBs
NCBI-GeneID:
7467391
NCBI-ProteinID:
XP_002313363
UniProt:
B9HP12
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Position
9:complement(5444255..5452785)
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AA seq
1934 aa
AA seq
DB search
MEFVGKSVNKKFNGFGVFKGYVKSYDESSGFFEIKYEDGDFEELDFSKVASLLEEEKEAA
GVSAAGPVDPKPRLGRKLKKRRRAEPKKPESGESGNSGVVEANGYLDMNRNVDLNDGFVG
DLRGNVDINVDLNETLEKGSGAVEDLREGVFDLNAGFNFDLNEEEEEGNPNPNPNYNHNS
NSNNNNNLSVDFEGKKRGCIDLNLDVSGDVDENFKEVDLECKVVGTQKRECGFDLNLGIG
DEMKDEMGVGFEGQMEETTNFEIQRMEEDEKSHFESAIPNGKLQGVHVSNDSCSGLVERI
EEVNIVSCEDFRAFDSVGVVDVKDVKEHFPEVIDSASVYKEESGSRKRGRRRRKLPDNLN
STPEVTVLSDANAVGDDCMVGSGSRRRGRRRKLADNLNSTPEVTVLSDANAVGDDCMVGS
GSQRRGRRRKLADNLNSIPEKIILLDANVVREDCTVRVDGNLGDIGSSYREVSASARKRR
KFLDNGNSMQETTVLRRSARRGSAKNNLLKDLSMSPVVSALTEDKPVKSHHEWPEEPVVL
HPKLQLPPSSQNLNLSGIPVLDLFSVYACLRSFSTLLFLSPFGLEEFVAALKGNSPSSLF
DFIHVSILEILRKHLEHLSNEGSESASNCLRSLDWGLLDLITWPVFMVEYLLIHGSGLKP
GFDLSRLNLFRSDYHKQPVSVKLEMLQCLCDDMIEVEAIRSELNRRSSGAEPDMDFDRNM
SPGACKKRKIAMDVSGNSCLTEDADDDWNSDECCLCKMDGNLICCDGCPAAYHAKCVGVA
NNSLPEGDWYCPECAIDRQKPWMKSRKLLRGAELLGVDPHNRLYFSSCGFLLVSDACDFE
LSFNYYQRDDLSAVIEVLKSSEMIYGSILEAIHKHWDIPVTLYGSSNLSSVKHTTSLDMS
IPACTSASLETCATKIETADGQNLEKFANRCCGHLDFEFSKSVVSPTCMSSEGSAETTQI
NFGDQNFQKGPDCSNRSAGFSNETEVPEKSPLVGDFSMTSNILDVKQEKNRCSPPTRCPS
SAVKATDEVTLQVQPRTEYMNYYSFGYTSASIAEVLLSKSSDKTTENSIKSDEEMALAQM
KVILKKSNRFRWSSIPSLNAEVQKEKCGWCFSCRATTDEPDCLFNMSLGPVQEGSESEVI
SLKTKRNRKGYLVDLICHILLIEDRLQGLLLGPWLNPHYTKLWRKSILKASDIATVKHLL
LKLEANVRRLALSADWVKHVDSGVTMGSSSHFVTASSRASLKNGIGRKRVRSTECQSNPC
ANPASGLGMFWWRGGRLSRRLFSWKVLPCSLTSKAARQAGCMKIAGILYPENSDFAKRSK
HVTWQAAVESSVTVEQLALQVREFDSNIRWDEIQNTHPLSMLDKELRKSFRLFKKVIIRR
KCVEEGTKYLLDFGKRRSIPEIVLKNGSMIEESSSERKKYWLNESYVPFYLLKSFEERKI
ARRSSKMNSGKLSEASVLVKKPLKQRGFSYLFARAERSEYHQCGHCHKDVPIREAVCCQN
CKGFFHKRHVRKSAGAITAKCIYTCHRCHYGKNAKTVKTNAKTVKTDTKRRKNSIKSTKV
QEQKSKKATVVRNSVRLKNSKKALRGSQPLQSRNRKVTVVPLRCSARKAKQKALQNKKVV
GRKRGRPAKSKKGANKKPKRGTLLHKKRTDTCHSYWRNGLLLSRNSDDERVTHFREKSLI
APSESAIDDQPKCHLCCEAGYTSISNYISCEICGEWFHGDAFGLDAENINKLIGFRCHMC
LKKTPPICPHAATTSHEVEIAEVQNDVGTELPKEETDGTLHQEEDHPGSLLVSESVHVEG
QLGTALDSNQSFVSESKLEAENGHALANVIENTDAIQTLHENLKPDLLTSPNESHLVEEN
TIKSGDDGIVTSDDAAQLSSCKVGVDLIETGLASLGPDGAKDSLTTPSLKLPIDGSFIET
IKMQPQSFMASTEL
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgtaggtaaatcagttaataagaagtttaatgggtttggtgtcttcaaagga
tatgtcaaatcctacgacgagtcgtctggattcttcgagatcaaatacgaggacggtgat
ttcgaagagcttgatttctctaaagttgcttctctgttagaagaggagaaagaagccgcc
ggtgtttctgctgccgggcctgttgaccccaagcctcgtttgggacggaagctcaagaag
cgtcggcgtgctgagcctaagaagcctgagagcggagagtcaggtaattctggggttgtt
gaggctaatgggtatttggatatgaatagaaatgttgatttgaatgatgggtttgtcggg
gatttgaggggaaatgttgatattaatgttgatttgaatgaaaccctggagaaaggaagt
ggggctgtggaggatttgagagagggggtttttgatttaaatgccgggttcaattttgat
ttaaatgaggaggaagaggagggtaatcccaatcccaatcctaattataatcataacagt
aatagtaacaataataacaatttaagcgttgattttgaagggaagaagagagggtgtatt
gacttgaatttggatgtgagtggtgatgtggatgagaattttaaggaggttgatttggag
tgtaaagttgtagggacccaaaagagggaatgtgggtttgatttgaatttggggattggt
gatgaaatgaaggatgagatgggtgttggttttgaagggcagatggaagagactacgaat
tttgagattcaaaggatggaggaggatgagaaaagtcatttcgaaagtgccattcctaat
gggaaattgcaaggagttcatgtctctaatgattcgtgttcggggttggttgagagaata
gaggaggtgaatattgtttcctgtgaagattttagggcttttgattctgttggagtggtg
gatgttaaggatgtcaaggagcattttccagaggtgattgattcagcaagtgtgtataaa
gaggagagcggaagtcggaagagggggaggaggaggagaaagcttcctgataatttgaat
tctactccagaagtgactgttctctcagatgctaatgctgttggggatgattgtatggtg
gggagtggtagtcggaggcgcgggaggaggagaaagcttgcagataatttgaattctact
ccagaagtgactgttctctcagatgctaatgctgttggggatgattgtatggtggggagt
ggtagtcagaggcgtgggaggaggagaaaacttgcagataatttgaattcgattccagaa
aaaataattctcttagatgctaatgttgttagggaagattgtacggtcagagttgatggg
aaccttggtgatattggaagttcatatagagaggtcagtgctagtgctagaaagaggaga
aaatttttggataatgggaattctatgcaagaaacaacagtcttgagaagaagtgctcgt
agagggtcagctaaaaacaacttgctaaaagatttatcaatgtctcctgtagttagtgca
ttgacagaggacaaacctgttaaatcacatcatgaatggcctgaagagcctgtggttctt
catccaaagttgcaattacctccttcttcacagaatttaaatttgagtggaattccagta
cttgacctattctcagtttatgcctgtttgaggtcatttagcactttgttgttcttaagt
ccatttgggttggaggaatttgtggcagcactgaagggtaactctccaagttctttattt
gattttattcatgtttcaattttggaaattctaagaaagcatttggagcacctttcaaat
gaaggttctgaatctgcttctaattgcctgaggagccttgattggggcttgttggacttg
attacatggcctgttttcatggttgagtacctcctgatccatggttcagggttgaaacct
ggatttgatcttagtagattgaatctgttcagaagtgactaccacaaacaacctgtatct
gtaaagttggagatgctacagtgtctttgtgatgacatgattgaggtggaggccattagg
tcggagcttaataggagatcttcaggagctgaaccggacatggattttgatcgaaatatg
agtcctggggcttgcaagaaaaggaagattgcgatggatgtctcaggtaactcatgccta
acggaggatgctgatgatgactggaatagtgatgaatgctgcctttgtaagatggatggg
aatttaatatgctgtgatggttgtcctgctgcatatcatgcaaagtgtgtaggtgttgcc
aataactctttgccagagggagactggtattgtcctgagtgtgcaattgacaggcagaaa
ccgtggatgaaatctcgaaagttgcttcgtggagcagagctattgggagttgatcctcac
aaccggctatattttagcagctgtggtttcttgttggtgtcagatgcatgtgacttcgaa
ctctcattcaattattaccaaagggatgatcttagtgctgttattgaagtgctaaagtct
tcagagatgatttatggtagcattttggaggctatccacaagcactgggatattcctgtt
actttgtacggatcaagcaatttgagttcagtaaagcatacaacaagcttagacatgagc
atacctgcatgtacctcggcatctttagaaacatgtgcaactaaaattgagactgctgat
ggacaaaacctggaaaagtttgctaatagatgttgtggtcatcttgattttgagttttca
aagtctgttgtgagcccgacatgcatgagttctgaaggatcagctgaaaccacccaaatc
aattttggggaccagaactttcagaaggggcctgactgttctaacagatctgctggcttc
tcaaatgaaactgaggttccagaaaagtcccctctcgtgggagacttttctatgacttcc
aacattttggatgttaaacaagaaaagaatcgatgttctcctcccaccagatgtccttca
tctgctgtaaaggcaacagatgaggtcacattacaggtgcagcccagaactgagtacatg
aactattacagttttggttatacatctgcttcaattgcggaagtgttattgtctaaatca
tcagacaagaccactgaaaactccataaaatcagacgaggaaatggctttagctcagatg
aaggtcattttaaagaaatccaacaggttccgttggtcaagtattcctagtctaaatgct
gaagtccagaaagaaaaatgtggatggtgcttctcttgcagagctaccaccgatgagcca
gattgcttgtttaatatgagtctgggtcctgttcaggaagggtctgagagtgaggtgatc
agtctcaaaaccaaaagaaacaggaaaggctatcttgtcgatttaatatgtcatattctc
ttgattgaagatcggcttcaggggctgctactgggtccatggctgaatccacattatacc
aagctttggcgtaaaagcattcttaaggcatctgatattgcaacagttaaacatttactg
ctcaaattagaggcaaatgtgcggcgtcttgcactttcagcagactgggtgaaacatgtg
gactctggtgtcacgatgggatcatcttctcattttgtgactgcttcctcacgtgcatca
ttaaagaatgggattggcaggaaaagggttaggtccacagaatgtcagtcaaatccttgc
gcaaatcctgccagcggattgggtatgttttggtggagaggtggtaggctttctcgccgg
ctgttcagttggaaggttttaccttgctccttgacatccaaggctgccagacaagctggt
tgcatgaagatagcgggcatattatatcctgagaattcagattttgcaaagagaagtaaa
catgttacctggcaagctgccgttgagtcatcagtgactgtagaacagcttgctttgcag
gttagagagtttgattcgaacattaggtgggatgaaattcagaacactcatcctttgtct
atgttggacaaggagcttagaaaatctttcaggttgttcaagaaggtaattattcgcagg
aagtgtgtagaagaagggacaaagtatcttcttgattttggcaagaggagaagtattcct
gaaattgttttaaaaaatgggtctatgattgaagaatcctccagtgaaaggaagaagtat
tggttaaatgaatcttatgttcccttttatctcttgaaaagttttgaagagagaaaaatt
gctcgcagatctagtaagatgaattctgggaaactctctgaggctagtgtgttagtgaag
aagcccttgaagcaaagagggttttcttatctttttgcaagagcagaaagatctgagtac
catcagtgcgggcattgtcacaaagatgttccgatcagggaagctgtctgctgtcagaat
tgcaagggattttttcacaaaaggcatgtgaggaaatctgctggtgccatcacagccaaa
tgtatatatacatgccaccgatgtcactatgggaaaaatgcaaaaacggtgaagacaaat
gcaaaaacggtgaagactgacactaaaagaagaaaaaatagcatcaagagcacaaaagtt
caggagcaaaaatcaaaaaaggccactgtagttagaaattcggtgcgactgaagaacagt
aaaaaagcattgaggggttcacaaccactacaatcacgaaacaggaaggttactgttgta
ccactacgttgttcagctaggaaagctaaacagaaagcattgcaaaacaagaaggttgta
ggacgcaagagaggaagaccagccaaatccaagaagggggcaaataagaaaccaaagaga
ggtactttgttgcataagaagagaacagatacttgtcatagttactggcgcaatggtctt
ctgttgtctagaaattcagatgatgaacgggtgacacattttagggagaaaagccttatt
gccccatcagagagtgccattgatgatcaacctaaatgccacctttgctgtgaagcagga
tatacatctatttcaaattatatttcttgtgagatttgtggagagtggtttcatggagat
gcatttggacttgatgcggagaacataaataagctcattggttttaggtgccatatgtgc
cttaagaagactcctcctatctgcccgcatgcagcaaccacaagccatgaggttgaaata
gctgaggtacaaaatgatgttgggactgaattacccaaggaagagactgatggtaccctt
catcaagaggaggatcatccaggttcacttcttgtgtctgagtctgttcatgtagagggg
caattaggtactgctctggattcaaatcagagttttgtgtccgagtctaagttggaagca
gaaaatgggcatgcacttgcaaatgtgattgagaatactgatgcaattcaaactttgcac
gagaatttgaaaccagatttactaacatcacctaatgaaagtcatttggtcgaagagaac
acaattaaatcaggagatgatggtattgtaacttcagatgatgccgcacagctctcttcc
tgcaaggttggtgtggatttgatagaaactggattggcttcattaggaccagatggtgca
aaggatagcttaacaacaccctccctgaaattaccaattgatggatcctttatagaaacc
atcaagatgcaaccacaatcattcatggcatcgactgaattgtaa
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