Populus trichocarpa (black cottonwood): 7467398
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Entry
7467398 CDS
T01077
Name
(RefSeq) serine--glyoxylate aminotransferase
KO
K00830
alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:
2.6.1.44
2.6.1.45
2.6.1.51
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00250
Alanine, aspartate and glutamate metabolism
pop00260
Glycine, serine and threonine metabolism
pop00630
Glyoxylate and dicarboxylate metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
pop01210
2-Oxocarboxylic acid metabolism
pop04146
Peroxisome
Module
pop_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
7467398
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
7467398
00260 Glycine, serine and threonine metabolism
7467398
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
7467398
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pop01007
]
7467398
Enzymes [BR:
pop01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.44 alanine---glyoxylate transaminase
7467398
2.6.1.45 serine---glyoxylate transaminase
7467398
2.6.1.51 serine---pyruvate transaminase
7467398
Amino acid related enzymes [BR:
pop01007
]
Aminotransferase (transaminase)
Class V
7467398
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Nup54_57_C
Motif
Other DBs
NCBI-GeneID:
7467398
NCBI-ProteinID:
XP_052311690
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Position
9:complement(5335980..5340904)
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AA seq
401 aa
AA seq
DB search
MDYFYGPGRNHLFVPGPVNIPEPVIRAMNRNNEDYRSPAVPAMTKTLLEDVKKIFKTTSG
IPFLIPTTGTGAWESALTNTLSPGDRTVSFLIGQFSLLWIDQQQRLGFNVDVVESDWGQG
ANLDILASKLAEDTAHTIKAVCIVHNETATGVTNNLAKVRKILDDYSHPALFLVDGVSSI
CALDFRMDEWGVDVALTGSQKALSLPTGMGIVCASPKAIEASKTAKSVRVFFDWKDYLKF
YNLGTFWPYTPSIQLLYGLRAALDLLFAEGLENVFERHARLGKATRLAVEAWGLKNCTQK
EEWFSDTVTAVVVPPYIDSAEIVRRGWKRYNLSLGLGLNKVAGKVFRIGHLGNLNELQLL
GCLAGVEMILKDVGYPVKLGSGVAAACAYLQNNTPLIASRV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggactacttttatggaccaggaaggaatcatctgtttgttccagggccggttaacatc
ccagaaccagtcattcgggcaatgaataggaacaacgaggattaccgttcaccagcagtt
ccagccatgacaaaaactcttcttgaggatgtgaagaagattttcaagactacctcagga
attccatttctcatcccaaccacaggcactggtgcatgggagagtgcacttaccaacaca
ttgtctcctggagatcgaactgtgtctttcttgataggccaattcagtttgctctggatt
gatcagcaacaacgccttggtttcaatgttgatgttgtagaaagtgactggggtcaaggt
gccaaccttgacatcctggcctcaaaacttgcggaagatactgcacacaccattaaggct
gtttgcattgttcacaatgagacagcaactggagttaccaacaacttggctaaagttaga
aaaatacttgatgactacagccatccagctctcttccttgttgatggagtgtcctccatt
tgtgcccttgatttccgtatggatgaatggggagtagatgtggctttaactggctctcaa
aaggctctttctcttcctaccgggatgggtattgtgtgtgcaagccctaaagctatcgag
gcatctaaaactgcaaagtcggttagagtcttctttgactggaaggactatttgaagttc
tacaaccttggaacattttggccatacactccttccatccaattgttgtatggacttaga
gcagcactggatctcctttttgcggaagggcttgagaatgtgtttgaaaggcatgctcgt
ctgggaaaagcaacaaggcttgctgtggaggcatggggcttgaagaactgtactcaaaag
gaggaatggttcagtgacacagtgactgctgtagttgttcccccgtacattgatagtgca
gaaattgttaggaggggatggaaaagatacaacttaagcttaggtttgggccttaacaaa
gtagctggcaaggttttcagaatagggcatctcggcaacctgaacgagctgcaattgctg
ggctgccttgctggagtggagatgatactcaaggatgtgggttacccggtaaagttggga
agtggagtagcagctgcttgtgcttatctgcagaataatacccctctgatcgcttccagg
gtttga
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