KEGG   Populus trichocarpa (black cottonwood): 7467446
Entry
7467446           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7467446
  KO
K24725  angio-associated migratory cell protein
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:pop04990]
    7467446
Domain-containing proteins not elsewhere classified [BR:pop04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   7467446
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_SCAP WD40_like WDR54 eIF2A Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_LRRK2 Beta-prop_EIPR1 Ge1_WD40 PEP5_VPS11_N Beta-prop_Nup120_160 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F Nbas_N Beta-prop_IFT80_2nd
Other DBs
NCBI-GeneID: 7467446
NCBI-ProteinID: XP_002326013
UniProt: B9IQM6
LinkDB
Position
19:complement(12631867..12637240)
AA seq 466 aa
CSTGLQPDQLYRLRSKEPRVTINWKKKILAVLSRATPISNCNNDNRNKTLAKTSHSSPAD
DAKESANTEIQIKNTKMNGPNRSLHDEEEDDQGEVFLDDSDIIDEVAVDEEDLPDADEDD
DDDDTDDSMHIFTGHTGELYTVSCSPTDPLLVATGGGDDKGFLWKIGLGDWASELKGHKD
SVSCLAFSSDGQLLASGGFDGLVQIWDASSGNHKCVLEGPDEGIEWVRWHPKGHLVLAGS
EDKSVWMWNADRGAYLNSFTGHEASVTCGDFTPDGKTICTGSDDASLRIWNPKSGENIHV
VRGHPYHTDGLTCLALSSDSTLAITGSKDNSVHIVNITSGRVVSSLASHSDSVECVELAP
SSPWAATGGLDQKLIIWDLQHSLPRATCEHQDGVTCVAWLGASRYVATGCVDGKVRLWDS
LSGDCIRTFSGHADAIQSLSLSANQDYLVSGSSDGTARVFEIAEFK
NT seq 1401 nt   +upstreamnt  +downstreamnt
tgttccaccgggctacaaccagaccagctttatcgactacgctcaaaagaaccacgtgta
acaatcaactggaaaaaaaaaatactagcagtactttcacgcgccactccaatcagcaac
tgcaataacgataataggaataaaaccctagctaaaacctctcattcttctccagcagac
gacgccaaggaatcggcaaacacagaaatacaaataaaaaacacaaaaatgaatggtcca
aatcgatcattacacgacgaagaagaagacgatcaaggcgaagttttccttgacgattcc
gatatcatcgacgaagtcgccgttgatgaagaagatcttcctgatgcggacgaggatgac
gacgacgacgacacggatgattctatgcacatatttaccggccataccggtgagctctat
acagtatcctgcagtccaacagatcctttattagtggcgaccggtggaggagacgacaaa
gggtttctttggaagattggtcttggagattgggcatctgagctcaaaggtcataaggac
tccgtgtcttgtttagcctttagtagtgatggacagttgcttgcatctggagggtttgat
ggtcttgttcaaatttgggatgcttcatcgggaaaccataaatgtgtacttgaaggtcct
gatgagggcattgagtgggtcagatggcatccaaaagggcatttggtgttggcaggttct
gaggacaaaagtgtctggatgtggaatgctgacagaggtgcctatcttaattcatttaca
ggacatgaagcaagtgttacctgtggtgattttacccctgatggtaaaacaatctgtact
ggttctgatgatgcatccctgaggatatggaatccaaaaagtggcgaaaacatacatgtt
gtgagaggtcatccataccacactgatggactgacatgcttggcattgagctcagattca
actctagctattactggttcaaaggataattctgtccacattgtgaacataacttcgggc
agggtggttagttctcttgcttctcactctgattctgttgaatgtgttgagcttgcacca
agctccccttgggctgctacgggaggcttggatcaaaaacttatcatctgggatctgcag
cattcattgccccgtgctacatgtgaacaccaggatggagttacatgcgtggcatggctt
ggtgcatctagatacgttgctacagggtgtgtggacgggaaagtgagactatgggatagt
ctctctggtgattgcataagaacattcagtggccatgctgacgccattcaatctctatct
ctatctgctaatcaagattaccttgtctcgggttcaagcgatggaacagcaagagtgttt
gagattgcagagttcaagtaa

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