Populus trichocarpa (black cottonwood): 7467512
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Entry
7467512 CDS
T01077
Name
(RefSeq) protein argonaute 10
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7467512
03036 Chromosome and associated proteins [BR:
pop03036
]
7467512
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
7467512
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
7467512
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
7467512
microRNA pathway
RISC loading complex
7467512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
7467512
NCBI-ProteinID:
XP_024463016
LinkDB
All DBs
Position
8:complement(10892506..10903124)
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AA seq
996 aa
AA seq
DB search
MPVRQMKESSEQHLVIKTHMQNSMNQPQKHHKTAQNGKGPPQPLQESSNTKPQNQASPPA
KNRGRRRGRGGRKSDQGDVCTRPSSRPCTVAHKPVLNPTGDLLANASNGHIENSKNVCEM
EMGLGFPTSSKSLSLAPRPGYGQVGTKCIVKANHFLAELPDKDLNQYDVTITPEVASRTM
NRDIMAELVRLYKDSDLGMRLPAYDGRKSLYTAGELPFAWKEFIIKLIDEEDGINGPKRG
REYKVVIKFVARANMYHLGQFLAGKRADAPQEALQILDIVLRELSSKRYCPVGRSFFSPD
IRAPQRLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVIEFVAQLLGKDILSR
PLSDSDRVKIKKGLRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEY
FQEMYGFTIQHTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNERQITALLRVTCQR
PRDRENDILQTVQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHETGKEKDCLP
QVGQWNMMNKKMINGMTVSRWACINFSRSVQESVARGFCNELAQMCQVSGMEFNSEPVIP
IYNARPEHVEKALKHVYHASTNRTKGKELELLLAILPDNNGSLYGDLKRICETDLGLITQ
CCLSKHVFKISKQYLANLSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPE
NGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRD
LLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQ
KRHHTRLFANNHRDRNSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYH
VLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYTEPVMQENGS
AGSGACHGAKGTRTGESGVRPLPALKENVKRVMFYC
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaaggcaaatgaaagagagctcggagcagcacttagtgataaaaacccacatg
cagaactccatgaaccaaccacaaaaacaccacaaaactgctcaaaatggaaaaggacca
ccacaaccactccaagaaagttccaacactaaaccccaaaaccaggcctcacctcctgca
aagaacagagggaggagaagaggcagaggtggtagaaagtctgatcaaggagatgtatgt
acgaggcctagttcaaggccttgtacagtggcacataaacctgttctgaacccaacaggt
gatctcctggcaaatgcttctaatgggcatattgagaatagtaaaaatgtttgtgaaatg
gagatgggtttggggttccctacctcaagcaagtctttgagtttagctcctaggcctggt
tatggtcaagttgggactaagtgtattgttaaagccaaccatttccttgcagagttacca
gacaaggacttgaaccagtatgatgttaccataactcctgaagtggcatcaagaactatg
aacagagatattatggcagagctcgtgaggctttacaaagattctgacttgggaatgaga
ctgcctgcttatgatggcagaaagagcttgtacacggctggtgagcttccttttgcttgg
aaggagttcataattaagcttattgatgaagaggatggtatcaatggtcccaagagaggg
agggaatacaaggtggtgatcaagtttgtcgcgagggccaatatgtatcatttaggtcaa
ttcttagctgggaaacgtgctgatgccccgcaggaagctctacagattcttgacattgta
ctgagagagctatcttcaaagaggtattgccctgtcggaagatccttcttttcacctgat
ataagagcaccacaacgacttggtgatggcttagagtcctggtgtggattttaccagagt
ataaggcctactcaaatgggactgtccttaaatattgatatggcctcagctgctttcatc
gagcctcttcctgtgatagagttcgttgcccagcttctaggcaaagatatattatcaagg
ccattgtctgattctgatcgagttaagattaagaagggtctcagaggagtgaaagttgaa
gttactcacagagggagtgtacgaagaaagtaccgtgtctcaggattgacatctcagcct
acaagagaacttgtgtttcctgttgatgataactcgaccatgaagtcagttgttgaatac
ttccaggagatgtatggctttaccattcaacatacacatctaccttgccttcaggttgga
aaccagaagaaagcaaactatctacctatggaggcttgcaaaattgtggaggggcagcgt
tatacaaaaaggttgaatgagaggcaaattactgccctcttaagagttacatgccaaaga
cccagggatcgagaaaatgacattttacagacagttcagcataatgcttatgatcaagat
ccttatgcaaaggaatttggtatcaaaatcagtgaaaagctagcttctgttgaggctcga
attctccctgccccttggctgaaatatcatgaaactggaaaagaaaaggattgcctgcct
caagttgggcaatggaatatgatgaacaagaaaatgattaatggaatgactgtaagccgg
tgggcatgtattaacttctctaggagtgtgcaagagagtgttgctcgtggcttttgcaat
gaacttgcccaaatgtgtcaagtttctggaatggagttcaattcagagcctgtgatccct
atttacaatgccaggcctgagcatgtagagaaagctttgaagcatgtgtatcatgcatcc
acgaacagaaccaaaggaaaagagctagagcttctcttagctattctacctgacaacaat
gggtccctctatggtgatctgaagcgaatatgtgaaactgatcttggtttaataactcaa
tgttgtctctcaaaacacgttttcaagatcagtaagcagtacttggcaaacctgtcgctc
aagatcaatgtaaagatgggtggtaggaataccgtccttttagatgctataagctgcaga
ataccattagttagcgacataccgacaattatttttggagcagatgtgactcacccagag
aatggagaggactcaagcccctcgattgctgctgtggtagcttctcaggactggcctgaa
gtaacaaaatacgctggattggtatgtgctcaagctcacagacaggaactcatacaggac
ttatacaaaacatggcaagatcctgttcgtggtactgtaagtggtggcatgatcagagat
ctcctgatttctttcaggaaagcaacggggcaaaagccgctaaggatcatattttatagg
gatggtgtaagtgaagggcaattttatcaagttctgctttatgagttggatgcaattcgg
aaggcctgcgcttctttggagccaaattatcagccaccggtgactttcattgttgtacaa
aaacgtcaccacacaagattgtttgctaacaaccatagggacaggaatagcacagacaag
agtggaaacatattacctggcactgtggttgattctaaaatctgtcatccaacggaattt
gacttttatctctgtagccatgctggtattcagggaacaagtagaccagcacactatcat
gtgttgtgggatgagaacaatttcacagctgatggaatccagtccttgacaaacaatctc
tgttacacatacgcaaggtgcacgcggtctgtttcagtggttccacccgcatactatgca
catttagctgcttttcgtgctcgattttacacggagccagtaatgcaggagaatggctca
gcaggcagtggtgcttgccatggtgctaagggaacgcggacaggagaatctggtgtccgg
ccacttccagccttgaaagagaatgtaaagagagtaatgttttattgttag
DBGET
integrated database retrieval system
