Populus trichocarpa (black cottonwood): 7467590
Help
Entry
7467590 CDS
T01077
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7467590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7467590
Spliceosome [BR:
pop03041
]
Common components
Common spliceosomal components
SR proteins
7467590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
SLU7_N
zf-CCHC_5
RRM_5
RRM_occluded
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
7467590
NCBI-ProteinID:
XP_002322837
UniProt:
B9IIW9
LinkDB
All DBs
Position
16:6301137..6304242
Genome browser
AA seq
290 aa
AA seq
DB search
MPRYDDRYASTRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRDYAFVEFSDPRDADDA
RHYLDGKDFDGSRIIVEFAKGVPRGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWK
NKCYRCGERGHIERNCKNSPKKLTKRGRSYSRSPDRSPSPHRGRSRSPSYSRGRSYSRSR
SPPKRERSAENENRSLSPEPKNTKARKRSPTPDEGSPRPSPKSRKMDDEQDREYSGSPRG
RSRSPRGERYRSPPQTNGRSRSPSPRDDRSPVDDDYEDNNRSPRDSDVSR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccacgttatgatgaccgatatgcgagtacgcgcctctatgttggccacctggctgct
aggacacgatcacgggatctggaacatcttttcagcaaatatgggcgagtacgagatgtg
gatatgaagcgtgactatgcatttgttgaatttagtgatcccagagatgctgacgatgca
aggcattacttagatggtaaggattttgatggaagtcgtatcatcgtggaatttgcaaag
ggggtacctcgtggttctcgagaatacttgggcagaggtcctcctccaggatctggacgc
tgcttcaactgtggcattgatggtcactgggctcgagattgcaaagctggagactggaag
aacaagtgttaccgttgtggggaaagaggtcatatagagagaaactgcaagaatagcccc
aagaaactcactaagcgtgggaggagttactctcgatcaccagatagatcaccctctcct
caccgtggcagaagccgtagcccaagttacagccgaggccgaagctacagccgatcaaga
tcaccaccaaagagggagcgaagtgctgagaatgagaacaggtcattgagccccgagcca
aagaataccaaggcaaggaagcgtagcccaacacctgatgaaggcagcccacgtccttct
cctaaatctcggaaaatggatgatgaacaggatagagagtacagtggcagccccagggga
cgaagcagaagccctcgaggtgagaggtatagaagtcctcctcagactaatggccgcagc
cgcagccctagtccaagagatgatagaagtcctgttgatgatgattatgaggataacaac
cgctcaccaagagatagtgatgtgtcacgttga
DBGET
integrated database retrieval system
