Populus trichocarpa (black cottonwood): 7467620
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Entry
7467620 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7467620 isoform X2
KO
K24741
WD repeat-containing protein 20
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pop04990
]
7467620
Domain-containing proteins not elsewhere classified [BR:
pop04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
7467620
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_Nup120_160
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF12
Pep3_Vps18
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
7467620
NCBI-ProteinID:
XP_024443474
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All DBs
Position
16:7097780..7106202
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AA seq
556 aa
AA seq
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MINSSNGMISTSSTSANTQSPGLKTYFKTPEGRYKLHYEKTHPSGLLHYAHGKTVTQVTL
AIIKDKPAPSTPMAPPSGFSTGSGVRSAAARLLGASNGSRALSFVGGNGGSKSISSSSSS
SSSSSRIGSLGTSCSSNSMINSNFDGKGTYLIFNVGDAIFITDLNSQDKEDPIKSIHFSN
SNPVCHAFDQDAKDGHDLLIGLSSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRC
MSIAWVPGGDGAFVVAHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVSHARYSKSNPIA
RWHICQGSINGIAFSNEGAYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDA
KYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSDGTGENVVYRFGS
VGQDTQLLLWDLEMDEIVVPLRRCPPPGGSPTFSTGSQSSHWDSVIPVGTLQPAPSMRDV
PKLSPVVAHRVHTEPLSGLVFTQECVLTVCREGHVKIWMRPGALDSQSGNSETIPSTSLK
EKPLLSSKIGSSTYKQ
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgatcaactccagcaacggcatgatttcaacgtcatcgacgtcggcgaacacgcaatca
ccggggttaaagacttattttaaaaccccagaaggacgttataagcttcactatgaaaag
acacatccttctggtctccttcactacgcccatggcaaaactgttactcaggtaacccta
gctattatcaaggacaagcctgccccatcaacaccgatggccccaccttcaggtttcagt
acgggcagtggtgtacgatcagctgctgctaggttgttgggtgctagtaatggaagccgt
gcgcttagctttgttggagggaatggtgggagtaaaagtattagcagtagcagtagtagt
agtagtagtagtagtaggattggatcattggggacatcatgctcaagtaattccatgatc
aattcaaattttgatgggaaagggacttacttgatcttcaatgtaggggatgccatcttt
ataactgatttaaattctcaagataaggaggacccaataaaatcgatccattttagtaat
tcaaatcctgtgtgccatgcctttgatcaagatgctaaggatggacatgatttgcttatt
ggcttgagttctggggatgtctactcagtgtcactgagacagcaattacaggatgttgga
aaaaagctagttggggcccatcattataacaaagatggttctgttaataatagtcgttgt
atgagtattgcatgggttcctggaggagatggtgcttttgttgttgcacatgctgatggt
aatttgtatgtctatgaaaagagcaaggatggtgctggtgattcttcattccctgttatc
aaagatcaaactcaattctctgtttcacatgcccgctacagtaagagtaacccaattgcc
agatggcatatttgccaaggttcaatcaatggcattgctttctcaaatgaaggggcctat
ttagcaactgttggaagagatggttacttgcgagtctttgactattcaaaagaacaactt
atatgtggtgggaaaagttattatggtgctctactatgttgtgcttggagcatggatgca
aaatatattttgactggaggagaagatgacctagttcaagtttggagtatggaagatcgg
aaggttgttgcgtggggtgaaggacacaattcatgggtaagtggagtggcttttgattca
tattggtcatcaccaaactcagatggcacaggggagaatgttgtgtaccggtttggttct
gttggtcaggacacacagttacttttatgggatctggaaatggatgagattgtagtgcca
ttacgtaggtgcccccctcctggtggatctcctactttcagtactggaagtcagtcttcc
cactgggacagtgttatcccagttggaactctgcaacctgctcctagcatgcgtgatgtt
ccaaagctttctcctgtagtggctcaccgtgttcacacggaacctctttctggtttagta
tttacgcaggaatgtgttcttactgtttgtagagagggccatgtaaaaatctggatgaga
cctggagccttagatagccagtcaggcaactcggaaaccatcccaagtaccagtttgaag
gagaagccattattgtcaagcaagattggcagttctacatataagcaatga
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