Populus trichocarpa (black cottonwood): 7467890
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Entry
7467890 CDS
T01077
Name
(RefSeq) transcription initiation factor IIB-2 isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
7467890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7467890
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
7467890
Prokaryotic type
Archaeal type
TFB
7467890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DUF3050
Motif
Other DBs
NCBI-GeneID:
7467890
NCBI-ProteinID:
XP_002324107
UniProt:
B9IK69
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All DBs
Position
17:complement(10577978..10579766)
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AA seq
318 aa
AA seq
DB search
MARNGEIDDYRDYCKDCKANTYIVLDHCTGDTICSDCGLVLESCYIDEIAEWRTFNDDNN
DKDPNRVGYNVNPLLSQGNLKTLISNNKGDHAIPRWQDGVSNSDRVLLQGFDIIEIIANR
LGLVRPIKDRAKEIFKKIEEQKTCVMRKRDSICAACLFISSRENKLPRTLNEISSVVYGV
TKKEINKAVQSIKRHVELEDMGTLNPSELVRRFCSNLGMKNHAVKAVHEAVEKIQDVDIR
RNPKSVLAAIIYTITQLSDEKKPLRDISLAADVAEGTIKKSFKDISPHVSRLVPKWYARE
EDIRRIRIPRNCGAKQLN
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggccagaaatggagagatcgatgactatagggattactgtaaggattgcaaggcaaac
acttatattgttcttgatcactgcactggggacacaatctgcagcgactgtggattagtt
cttgaatcttgctacatcgatgagattgcagaatggcgaaccttcaacgatgataacaac
gataaagatccgaatcgtgtcggttataacgtaaaccctcttttaagccaaggcaaccta
aaaaccttaatctccaacaacaagggtgatcatgcaattcccaggtggcaggacggtgta
tcaaactctgatagggttctcctccaaggttttgacattattgaaattattgctaatagg
ttaggacttgtgcggcccatcaaggatagggctaaagagatattcaagaagatagaagaa
cagaaaacttgcgttatgaggaagagggattcaatctgtgcggcctgtttgttcatatct
agtagagagaataagttgccgaggacattgaatgaaataagcagtgttgtttatggggtg
accaagaaggaaattaacaaagctgtacagtctataaagaggcacgtagagttggaggat
atggggaccttgaatcctagtgaacttgtaaggaggttttgttcaaatcttggaatgaaa
aatcatgctgtcaaggctgtgcacgaagctgttgagaaaattcaagatgttgatataagg
aggaaccctaagtccgtgttggctgccattatttacacaatcactcagctttctgatgag
aagaaacctcttcgagatatctcattggcagctgatgttgcagaagggaccatcaagaag
tccttcaaagacatatctcctcatgtttccaggctagtaccaaaatggtatgccagagag
gaggatatcaggagaatccgaatccctcgaaattgtggtgccaagcaactcaattaa
DBGET
integrated database retrieval system
