Populus trichocarpa (black cottonwood): 7467895
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Entry
7467895 CDS
T01077
Name
(RefSeq) protein RIK isoform X1
KO
K25780
kelch domain-containing protein 4
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7467895
Spliceosome [BR:
pop03041
]
Complex B
Other components
Prp19-related factors
7467895
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Gene cluster
GFIT
Motif
Pfam:
KH_12
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
7467895
NCBI-ProteinID:
XP_002323898
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Position
17:10627521..10635005
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AA seq
614 aa
AA seq
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MVEESSSRIPTDDSTANSDTSSSQSRQSICCRRKRKWDQPAESLVSAGVPVSDAVQLGNV
GSLVGISLPGAASVSGALLTNPQIAIVPPMFLVPSMPQNTAAVVPKLNQPKVQDELIIAR
EIVINDAESSVRYKLTKRQTQEEIQKFTGAVVITRGKYRPPNAPPDGEKPLYLHISAAAH
LKDTAERILAVDRAAAMVDEMLKQGQSSQPASSIIQMPAVNGVKALSTCVFLGFDTDPTL
NIAARIRGPNDQYISHIMNETGVTVVLRGRGSGNCESQSTGESQQPLHLFLSASNPKGLE
DAKRLSENLLDTISLECGASRASSCKVYNAVPPPQTLTGAHAAGIEHKLNTSAVTGLMLP
TMSSTPPIPASLVSVSGVATVCSQGTVSQSGAMLSCGQPQPSVAGYSQPFVMGGTSYSGY
GGIYPQATPLQQVAQVLRQPPSPIPSIVSPTTSIANAAPNSGMNSIAEKRPTQKRKFQEV
PVGSKGPAKLHQGSELSKSGKSLQADLGVRNISTMPAPKKLVHPSSNGMPPPPPRAMPPP
PPPPKFTSSTPAARLQDKSNCWNKTMSDAVPVVSDTLVKLMEYGEEDDDPEDTSEESPNG
KSSVVAVRKPFWAL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtagaggaaagcagtagtaggattcctacagatgattcgacggcaaactcggataca
tcatcatcacaatccaggcaaagcatatgctgcaggagaaagagaaagtgggatcagcct
gcggagtcactggtttcagctggagttccagtatctgatgctgtacaattaggcaatgtg
gggtctcttgttgggatctcgttaccaggggctgcttcagtttctggtgcgcttttaaca
aatccacaaattgctattgttccgcctatgtttctggtgccttcgatgccacaaaatact
gctgctgtggtcccaaaactaaatcaacctaaggttcaggatgagttaataatagcacgg
gagattgttataaatgatgcagagtcctctgttcgctacaagcttacaaagcggcagaca
caggaagaaattcagaaattcactggtgctgtggtgataactaggggcaagtatcgtcca
ccaaatgcaccgccagatggtgaaaagccattatatcttcacatatccgcggctgctcac
ttaaaagatactgcagaacggattttggcagttgatcgggcagcagccatggttgatgaa
atgctgaaacagggtcagagctcacagcctgcttcttccattatacaaatgcctgcagtt
aatggagtaaaggcgctaagtacgtgtgtgtttttgggctttgacacagacccaacattg
aatattgctgctcgaattcgcggaccaaatgaccagtacataagtcatattatgaatgaa
acaggggttacagtcgtactaagagggcgtggttctggaaactgtgaaagccagagtact
ggagaatcgcagcaaccacttcatttatttttgtctgctagtaatccaaaaggtcttgaa
gatgcaaaacgtttatctgaaaaccttctggatacaatcagtttagagtgtggtgcttcc
agggcttcgtcatgtaaagtttataatgctgtcccaccaccgcagacattaactggagct
catgctgctgggattgagcacaaactaaatacaagtgcagtcactggattgatgctacca
acaatgagctctactccacctattcctgcttctttggtttcagtttccggggttgctact
gtctgttcccaagggactgtatcacagtctggggcaatgttgagctgtgggcaaccccag
ccaagtgtggctggttattcccagccttttgtaatgggaggaacgagctatagtggatat
ggtggtatatatcctcaagccacacctttgcaacaagttgcccaagtccttaggcagcca
ccttcccccatcccttccatagtttctcctacaacgtctatagcaaatgcagcaccaaat
tcaggaatgaactctattgctgaaaaacgacctacacagaagcggaagtttcaggaagta
ccagttggttcgaagggtcctgcaaaacttcatcagggatcagaattgtccaagtctggt
aaatcgctgcaggcagatttgggtgttagaaatatctcaactatgccagctccaaaaaag
ttggtccacccatcatccaatggaatgccaccccctcctccacgagccatgcctccaccc
ccacctccaccaaagttcacttcatcaactccagctgcaagactgcaagacaagagcaat
tgttggaataaaaccatgtctgatgctgttcctgttgtttcagatactttagtcaaattg
atggaatatggcgaagaagatgacgatcctgaggataccagtgaagaatccccaaatggg
aagtccagtgtcgtggcagttcgaaaaccattttgggctttatga
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