Populus trichocarpa (black cottonwood): 7467924
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Entry
7467924 CDS
T01077
Name
(RefSeq) auxin response factor 19
KO
K14486
auxin response factor
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7467924
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
7467924
NCBI-ProteinID:
XP_024445300
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Position
18:7397470..7404909
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AA seq
1102 aa
AA seq
DB search
MKVPSNGFLPNSAEGERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE
TDFVPSYPNLTSKLICMLHNVTLHADVETDEVYAQMTLQPVSKYDKEALLASDLGQKQSR
QPTEFFCKTLTASDTSTHGGFFVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRH
IYRGQPKRHLLTTGWSVFVSTKRIFTGDSVLFIRDEKSQLLLGIRHANRQQPALSSSLIS
SDSMHIGILAAAAHAAANNSPFTIFYNPSASPSEFVIPFSKYNKAMYTQGSLGMRFRMMF
TTEESGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTASERPNRVSIWEIEPVVTP
FYICPPPFFRPKFPKQPGMPNDESDTENAFKRAVPWLGDEFGKKDAASSIFPGLSLVQWM
SMQQNNQFQAAQSGFFPPMVPSNDLQKNLSTDDPSKLLNFQAPGLSAPSIQFNKTNSENQ
VGQLRRPPMAWTQQQQLQQLLQTSINQQQPPYPQQPQPQLQQSISQEQHHEHQHRPQPQQ
QPQPQLQPQQIQQLPPQWQQLQQLQQQIFQPPALNDSVVSPNQIPNQNFQKPFVYSQQQQ
QQQQQLLASNIQSQSIPSPNRSSYQLTSLPQDSQFHQQMEQQSNFSHRQQTQLQQSPLLL
LQQNPSQRVQPQPHQQIQQLSQPDNSEQQLHLQLLQNLQQQQQQQLLSPESLLLQSQKLQ
QQQQTHQQNQQLHQSPLTQNQQPLGSNSFPTAAALMRTQSFPMNQLQGMQNATMAVRYHS
SITDGEAPSCSTSPSTNNWQISPLNFLNRNQQAPAMLMGDSAIEPASNLVQELQSKSEIH
IKNEFPSLKGLDQLKYKGTVTDQLEASSSGTSYCLDAGTIQQNFSAPTFGLDGDVQSHPA
SNIDALAPDTLLSREYDSQKDLQNLLVNYGGTAQDINMELSTAAISAQSFGVSNIPFKPD
GSNDIAINDTGILNNGAWTNQNQRMRTYTKVQKRGSVGRSIDITCYKGYDELRHDLARMF
GIEGQLEDPQSSDWKLVYVDRENDILLVGDDPWEEFMSCVQSIKILSSAEVQQMSLDGDL
GNVPAPNQACSGTDSGNVWRGQ
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttccttcaaatgggttcttgccaaattctgcagaaggagaaagaaagagtatc
aattcagagttgtggcatgcttgtgctgggccactggtttccttgcctccagttggaagc
cttgtagtttacttccctcaaggtcacagtgagcaggttgcagcttcaatgcaaaaggag
actgatttcgtaccaagttaccccaaccttacttccaagttgatttgcatgcttcataat
gtcacattgcatgctgatgtggaaactgatgaggtctatgcacaaatgacccttcaacca
gtaagcaaatatgacaaggaagcattactggcatctgacctggggcaaaagcagagcagg
caacctacagagttcttctgcaaaactcttacagctagtgacacaagtactcacggtgga
ttttttgtacctcgtcgagcagccgagaagattttccctcctctagacttttcaatgcaa
ccacctgctcaagagctggtagccagagacttacatgataatacatggacatttaggcat
atttatcgagggcaacccaaaaggcacctgctcactacaggttggagtgtctttgtcagc
acaaaaagaattttcacaggtgattccgttctattcataagagatgaaaaatcacagctt
ctcttgggtataaggcatgctaatagacaacaaccagctctctcttcgtcacttatatcc
agtgatagtatgcatattggaattcttgctgctgcagctcatgctgctgcaaacaacagc
ccatttactatattttacaacccaagtgcaagcccttctgagtttgtgatccccttctcc
aagtataataaagctatgtatacgcaagggtcacttggcatgagatttagaatgatgttt
acgactgaagagtcaggagtgcgtagatacatgggtacaatcactggtatcagtgatttg
gatccagtgcgctggaaaaattcacagtggcgcaatcttcaggttgggtgggatgaatca
actgccagtgaacggccaaacagagtttcgatttgggagattgagcctgttgtaactcct
ttctacatatgtccacctccatttttcagaccaaagttccctaagcagccagggatgcca
aatgacgagtctgatacagagaatgcttttaaaagagccgtgccttggcttggagatgaa
tttggcaagaaggatgccgcaagctcaatctttcctggtttgagcttagttcaatggatg
agcatgcagcaaaataatcagtttcaagctgctcaatcaggattcttcccaccaatggtt
ccttccaatgacctgcagaaaaaccttagcactgatgatccatcaaagttattgaatttt
caagctcctggcctatctgctccaagcatacaatttaacaaaacaaattcagaaaaccaa
gtcggtcagttacgtcggccaccaatggcatggactcaacaacagcagctgcagcaatta
ttgcagacttccattaaccaacagcagccaccttatccccaacagccgcagccacagctg
cagcagtctatttctcaagagcaacatcatgagcatcagcatcgaccacaaccacagcaa
cagccgcagccacagctgcagccacaacaaatacaacaactgccaccacaatggcaacag
cttcaacagcttcagcagcagattttccaaccacctgccttaaatgacagtgtggtttct
cctaatcagattccaaatcagaattttcagaaaccatttgtatactcccagcagcagcag
cagcaacaacagcagttactggcaagcaatatccaatcccaaagcatcccttctcctaat
agaagttcatatcagctgacctctttaccacaagactcgcagtttcatcaacaaatggag
cagcaatctaacttctctcacagacaacagacacagttgcaacagtccccactcctgttg
ttacaacaaaacccatcacagagggtgcagccacagccacatcaacaaatacagcaacta
tcacagcctgacaactctgagcaacagcttcatttacagttgctacagaacttacagcag
cagcagcagcagcagctgctctcccctgaaagcttacttctgcagtctcagaagctacag
cagcagcagcagacccatcagcaaaaccagcaacttcatcagtcacctctgacacagaat
cagcagccacttggcagcaacagcttcccaacagcagcagcactcatgcgaacacaatct
tttcctatgaaccagctccaaggcatgcagaacgcaaccatggcagttagataccattca
agtattacagatggagaagcgccatcttgttcaacctcaccttccactaataattggcag
atttctccactaaatttcctgaacagaaaccaacaagctccagccatgttgatgggtgat
tcagctattgagcctgcaagtaatcttgttcaagaactccaaagcaagtctgaaattcac
atcaagaacgagtttcccagcttgaaaggtctagaccaactaaaatataaaggtactgtg
actgatcaattggaagcttcgtcttctggaacatcgtattgcctagatgctggtaccatc
cagcagaatttctcagccccaacctttggcttggatggcgatgtccaatcacatcctgca
tctaatatcgatgcattggcacctgatactctattatcaagggaatatgactctcaaaag
gatcttcagaacttgcttgttaattatggtggtaccgcacaagatatcaacatggagttg
tccactgctgcaattagcgctcagtcatttggtgtatcaaacatacctttcaagcctgat
ggttcaaacgacattgccatcaatgatactgggattttgaacaatggagcctggaccaac
cagaatcaacgaatgcgtacatatacaaaggtccaaaagcgtggctcagttggaagatct
attgacatcacctgttataaaggttatgacgagcttagacatgatctggcccgaatgttt
ggcattgaagggcaacttgaagatccacaaagttcggattggaaactggtatatgttgat
cgtgaaaatgacatattacttgttggtgacgatccttgggaggagttcatgagctgtgtt
cagagcataaaaatactgtcatctgctgaagtgcaacagatgagcttggatggagatctt
ggtaatgtgccagctcccaatcaagcttgtagtggcactgacagtgggaatgtctggagg
gggcagtaa
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integrated database retrieval system