KEGG   Populus trichocarpa (black cottonwood): 7467973
Entry
7467973           CDS       T01077                                 
Name
(RefSeq) RNA-binding protein Y14
  KO
K12876  RNA-binding protein 8A
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03013  Nucleocytoplasmic transport
pop03015  mRNA surveillance pathway
pop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    7467973
  09122 Translation
   03013 Nucleocytoplasmic transport
    7467973
   03015 mRNA surveillance pathway
    7467973
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    7467973
   03041 Spliceosome [BR:pop03041]
    7467973
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     7467973
Spliceosome [BR:pop03041]
 Complex C
  Other components
   EJC/TREX
    7467973
SSDB
Motif
Pfam: RRM_1 RRM_3
Other DBs
NCBI-GeneID: 7467973
NCBI-ProteinID: XP_002299789
UniProt: A9PCB0
LinkDB
Position
1:27156838..27160250
AA seq 205 aa
MANTEAEAVDFEPEEDDLMDEDGAADADASSSPRAPLPKLKSAITGGSASSSLSAPKKTK
GRGFREEVDAERQSRLSGRGFDSLGSDGGPGPQRSVEGWIILVSGVHEEAQDDHLQEAFG
EFGEIKNLHLNLDRRTGFVKGYALIEYEKFEQAENAIASMNGGTLLEQIIYVDWAFSNGP
SNWASRRKNMRPERTNRSRSPRRRY
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcaaacacggaggccgaagcggtggattttgagccagaggaagatgatttgatggac
gaagacggtgccgccgacgctgacgcctcctcctcacctcgtgctccactccccaagtta
aagtcagctattactggaggcagcgcgtcttcttcactctccgctcctaaaaagactaaa
ggccgtgggtttagagaagaggttgatgctgagagacagagccgcctctctggtcgtgga
tttgattccctcggttctgatggtgggcctggcccccagcgatctgttgaaggatggata
attttggtgagtggagtgcatgaggaagcacaagatgatcatctgcaagaagctttcggt
gaatttggggaaataaaaaatttgcatttgaatcttgatcgccgcactggttttgttaag
ggctacgcgctgatagaatatgagaagtttgagcaagcagagaatgcaatagcttcaatg
aatgggggaacattgctcgaacagattatctatgttgattgggccttcagcaatggcccc
agcaattgggcctccagaagaaagaacatgagacctgaacgaacgaatcgctcaaggagt
cctaggaggagatattaa

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