KEGG   Populus trichocarpa (black cottonwood): 7467986
Entry
7467986           CDS       T01077                                 
Name
(RefSeq) signal recognition particle 54 kDa protein 2
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03060  Protein export
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    7467986
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pop02044]
    7467986
Enzymes [BR:pop01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     7467986
Secretion system [BR:pop02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   7467986
  Eukaryotic Sec-SRP protein
   7467986
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW nSTAND3 ResIII Fe-ADH CLP1_P SRPRB AAA_17 AAA_33 AAA_22 nSTAND_NTPase5 MMR_HSR1 AAA_19 nSTAND_NTPase7 Zeta_toxin MeaB AAA_16 ATP_bind_1 APS_kinase PDE8A_N UvrD-helicase CbiA
Other DBs
NCBI-GeneID: 7467986
NCBI-ProteinID: XP_002299799
LinkDB
Position
1:26991188..26995654
AA seq 495 aa
MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV
NLDDLAAGHNKRRIIQQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTK
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAEEGVETFK
KENCDLIIVDTSGRHKQEAALLEEMRQVSEATKPDLIIFVMDSSIGQAAFDQAQAFKQMV
AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPIGQVFSMLPGFSAEL
MPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKLLNDSRMMRIARGAGRPIRDVMEMLE
EYKRLAKVWSKMKGLKIPKKGEMSSLSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM
GSAKDMMGMFGGGDK
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggtgttggcgcagttaggagggagcatatcccgagcaatccagcaaatgagcaatgca
acaatcatcgacgagaaagcattaaacgactgcttgaacgagatcactcgcgcgcttctt
caatccgatgtccaattcaagcttgttcgcgacatgcaaactaatatcaagaaaatcgtc
aatctcgacgatctcgctgccggtcacaacaagcgcagaatcatccaacaagcgatattt
aacgagctctgcaagattttggacccagggaagtcctcatttaccccaaagaaggggaaa
actagtgttgttatgtttgtaggtttacaagggtctggaaaaacgacgacgtgtacaaaa
tacgcttattatcatcagaaaaaaggatggaaacccgccctcgtttgcgctgatacgttt
agagctggtgcatttgatcagttaaagcagaatgcaactaaagctaaaattccattttat
ggaagctatacggaatcggatcctgtaaaaatagctgaggaaggtgtagaaacatttaag
aaggaaaattgtgatcttataattgttgatacaagtggacggcataaacaggaagctgca
cttttggaagaaatgcgtcaagtttcagaagcaactaaaccggatcttattatatttgtt
atggatagcagtattggtcaagctgcatttgatcaagctcaagcttttaagcaaatggtt
gcagttggagctgtgattattactaaaatggatggtcatgcaaagggtggtggtgcgctt
agtgcagttgcagcaactaagagtcctgtcatttttattggtactggagagcatatggat
gagttcgaagtctttgatgttaaaccttttgttagtcgccttttaggcatgggtgactgg
tctggattcatggacaaaattcatgaggttgttcccatggatcaacagcccgagcttcta
caaaagctgtcagaagggaactttaccttaaggattatgtatgagcaattccagaatcta
ctaaaaatgggtcccattggccaggtattttcaatgcttcctgggtttagtgctgaatta
atgccaaaaggtcatgaaaaggaaagccaggctaagattaagcgatacatgaccatgatg
gattcaatgactaatgaagagttggatagttcaaatccaaagctcttgaatgactcacga
atgatgaggatagcacggggtgctggccgtccaattagagatgtaatggaaatgttggaa
gagtacaagcgacttgctaaagtctggagcaaaatgaaggggcttaagattccgaagaag
ggtgagatgagttccctgtctagaaacatgaatgcacagcacatgagcaaagtcctccct
ccacagatgctgaagcagattggtggcatgggtggtttgcaaaacttaatgaagcaaatg
ggatcagctaaagacatgatgggcatgtttggaggcggggacaagtaa

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