Populus trichocarpa (black cottonwood): 7468053
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Entry
7468053 CDS
T01077
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00750
Vitamin B6 metabolism
pop01100
Metabolic pathways
pop01240
Biosynthesis of cofactors
Module
pop_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
7468053
Enzymes [BR:
pop01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
7468053
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NMO
His_biosynth
Motif
Other DBs
NCBI-GeneID:
7468053
NCBI-ProteinID:
XP_002308219
UniProt:
B9HCW7
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Position
6:7692300..7694993
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AA seq
309 aa
AA seq
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MAGTGVVAVYGNGTITETKKSPFSVKVGLAQMLRGGVIMDVVTAEQARIAEEAGACAVMA
LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDES
EVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRHV
RSVMGDIRMLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM
MQLGCDGVFVGSGVFKSGDPVKRGRAIVQAVTHYSDPELLAEVSCGLGEAMVGLNLNDKK
VERFASRSD
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaccggagttgtggctgtctacggcaatggaacaataacagaaaccaaaaaa
tccccattctccgttaaggtaggcctagctcaaatgctcagaggcggggtcataatggac
gtggtcaccgctgaacaagcccgtatagccgaagaagccggagcttgcgccgtcatggca
ttagaacgagtccccgccgacatccgtgcacaaggtggtgtggcacgcatgagcgaccct
cagctcatcaaagaaataaaacaagcagtgaccatccctgtcatggcgaaagcccgaatc
gggcatttcgtcgaagcccaaatccttgaagcgattggtgtcgattatgttgacgaatcc
gaggttcttacactggctgatgaagataatcacattaacaaacataacttccgcatccct
tttgtttgcggatgccggaatttgggtgaggccttgaggaggataagggaaggggcggca
atgattaggactaaaggcgaggcgggcacggggaacgttattgaagctgttaggcatgtt
aggtctgtgatgggggatataaggatgttgagaaatatggatgatgatgaggtttttacc
tttgcaaagaagattgctgcgccttatgatttggttatgcagacaaagcagcttgggagg
ttgcctgttgtgcaattcgcggcgggtggagtggctactcctgctgatgcagcgttgatg
atgcagttgggatgcgatggggtgtttgtagggtctggggtttttaagagtggggatccg
gttaagagggggagagctatcgtgcaggctgttacccattatagtgatcctgagctgctg
gctgaggtgagttgtgggcttggtgaggctatggtcgggcttaatttgaatgataagaag
gtggagaggtttgctagtcggtcggattag
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