Populus trichocarpa (black cottonwood): 7468077
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Entry
7468077 CDS
T01077
Name
(RefSeq) regulatory-associated protein of TOR 1 isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
7468077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7468077
Membrane trafficking [BR:
pop04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
7468077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
HEAT
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EIPR1
HEAT_2
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
7468077
NCBI-ProteinID:
XP_002309174
UniProt:
B9HD96
LinkDB
All DBs
Position
6:complement(8211421..8224186)
Genome browser
AA seq
1377 aa
AA seq
DB search
MALGDLMASRFSSQSPVAFVSNHYDHYPSSHEDDAIDVARRDDNNNSNNNRDRDSDTAST
SNYGGGNATASTTATTTTSTAYLPQTVVLCELRHEAFEASVPTGPSDSGLVSKWRPKDRM
KTGYVALVLCLNISVDPPDVIKISPCARMECWTDPLSMAPQKALETIGKNLSIQYERWQP
KARYKVQLDPTVDEVKKLCNTCRKYAKSERVLFHYNGHGVPKPTANGEIWLFNKSYTQYI
PLPVSDLDSWLRTPSIYVFDCSAAGMIVNAFLELHDWNASGSAGSTRDCILLAACEAHET
LPQSDEFPADVFTSCLTTPIKMALKWFYRRSLLCDSLDYSLIDKIPGRQNDRKTLLGELN
WIFTAVTDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSANCSPISHPMLPPT
HQHHMWDAWDMAAEICLSQLPSLVEDPNAEFQPSPFFTEQLTAFEVWLDHGFEHKKPPEQ
LPIVLQVLLSQCHRFRALVLLGRFLDMGRWAVDLALSVGIFPYVLKLLQTTTPELRQILV
FIWTKILALDKSCQVDLVKDGGHTYFIRFLDSLEAYPEQRAMAAFVLAVIVDGHRRGQEA
CIKAGLIHVCLKHLQGSVPNDTQTEPLFLQWLCLCLGKLWEDFTEAQILGLQADSPAIYA
PLLLEPQPEVRASAAFALATLLDVGGDVCRDGATGDDEFDDDEKIRAEISIVRSLLSAVS
DGSPLVRAEVAVALARFAFGHKQHLKSIAASYWKPQSNSLLSSLPSLAHIKATGSGHANP
NQYVPHASIVSSQFGPLTRVGSDSPSVVRDGRASTSSPTTAGIMHGSPLSDDSSLHSDSG
ILNDIVSNGEVLHSRPKPLDNALYSQCVLAMCTLAKDPSPRIASLGRRVLSIIGIEQVVT
KSVNSTGSSGPKTSSPSLAGLARSSSWLDMHAGHIPLTFRTPPVSPPRSSYLTGMRRVCS
LEFRPHLMNSPDSGLADPLLASVGSSGGTERSLLPQSTIYNWSCGHFSKPLLTTPDDTEE
ILVRREEREKFALEHIAMCQHSSVSNLNNRIASWDTKFETGTKTALLQPFSPIVVAADEN
ERIRVWNYEEATLLNGFDNHDFPDRGVSKLCLVNELDDSLLLVASCDGNIRIWKDYTVKG
KQKLVTAFSSIQGHKPGVRSLNAVVDWQQQSGYLYASGEISSIMLWDLDKEQLIHSIPSS
SDCSVSAMSASQVHGGQFTAGFVDGSVKLYDVRTPEMLVCATRPHTENVEKVVGIGFHPG
LDPGKIVSASQAGDMKFLDMRNYRDPYLTIKAHRGSLTALAVHRHAPIIASGSAKQIIKL
FSLNGEPLGSIRYHLTIMAQKIGPVSCLTFHPYQVLLAAGATDALFSIYADDNTQAR
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggagatttaatggcgtcaagattctcctcacaatctccagttgcttttgta
tcgaaccattatgatcattatccgtcaagtcacgaagatgatgctattgatgtagccaga
agagatgacaataataatagtaataataatagagatagagattctgatactgctagcact
agtaattacggcggaggcaatgccacggcaagcaccaccgccacaaccactactagtacg
gcgtatttgccgcagactgttgttttgtgtgagcttagacacgaggcatttgaagcttct
gtgcctaccggtccgtctgatagtggactcgtttcgaaatggcggcccaaggaccgaatg
aagactggatatgtagctctagttttgtgtttaaacatcagtgttgatcctccggatgta
ataaagatatccccttgtgccagaatggagtgctggacagatccactttcaatggcacct
caaaaagctcttgaaacaattggaaaaaacttaagcattcagtatgaaaggtggcaacct
aaggctcgctacaaggttcaacttgatcctactgttgatgaagtgaagaaactttgtaat
acatgccgaaaatatgccaagtctgagagagttttgtttcattacaatggacatggtgtt
ccaaagccaactgctaacggtgaaatctggctattcaataagagttatacacaatacatt
cccttgccagtcagtgatcttgattcctggctgagaacaccgtcaatctatgtttttgat
tgctctgctgctgggatgatagtcaatgcatttctggagcttcatgactggaatgcttct
ggctctgctggatccacgcgggattgcattttgcttgcagcctgtgaagcacacgagact
ttgccacaaagtgatgaatttcctgctgatgtgttcacttcatgcctcaccactcctatc
aagatggcattgaaatggttctacagacgttcactactttgtgactcccttgactactca
ttaattgataaaattcctggccggcaaaatgatcgtaaaacgcttctgggagaattgaac
tggatctttactgcagtgacagacacaattgcttggaatgttcttcctcgtgatcttttc
cagaagttgttcaggcaagatttgctagttgccagtctgttcagaaattttttgcttgct
gaaagaattatgcgttcggcaaattgttctccaatttctcatccaatgttgccaccaacc
catcagcatcatatgtgggatgcatgggatatggctgctgaaatttgcctctctcagctt
ccatctctggtcgaggatccaaatgcagaattccagccgagtcctttttttactgaacaa
ctgacggcttttgaggtgtggttggaccatggatttgaacataagaagccacccgagcag
ttgcctattgttcttcaggttctgctaagtcaatgtcatcggttccgagcactggtgctt
ctagggagattccttgatatgggacgctgggcagtggatctggctttatctgttggaata
tttccatatgttttgaagctgttgcaaacaacaacaccagaactaaggcaaattcttgta
ttcatatggacaaaaattctagcgctggataagtcatgccaggttgatcttgttaaggat
ggggggcatacatattttattaggtttctcgacagcttggaagcatatccagaacagcgt
gcaatggctgcatttgttttggctgttattgttgatggacacagacggggccaggaagcc
tgtattaaagctggtttgattcatgtgtgcttgaagcaccttcaaggttcagtgccaaat
gacacacaaactgaacccttgtttcttcagtggctatgcctctgcctgggaaagctgtgg
gaggatttcacagaggctcagatactaggtttgcaggctgactccccagcaatatatgct
cctctactgttggagccccaaccagaggttagggcttctgctgcatttgcactggccacc
ttgcttgatgttgggggtgatgtctgcagggatggtgctactggagatgatgagtttgat
gatgatgaaaaaattagagctgaaattagtattgttagaagtctattaagtgctgtttca
gatggaagtcctctggtcagggcggaggttgctgtagctctggcacgctttgcatttggc
cacaaacagcacctcaagtcaattgctgcctcctattggaaacctcagtctaattctcta
ctcagctcattaccttctttggcccatataaaagctacaggtagtggacatgccaaccct
aatcagtatgtgccacatgcaagtattgtttcatctcaatttggccctctgacaagagtt
ggtagtgacagcccatccgtggttcgagatggaagggcttccactagcagtcctactaca
gctggaattatgcatggatcaccattatctgatgattcatctctgcattctgattctggt
atattgaatgacattgtcagcaatggggaagtactccattcaaggccaaagcctctggat
aatgcattatattcccagtgtgtgctggctatgtgcactttggccaaggatccttctcca
cgcatagcaagccttggtcgaagggtactgtcgattattgggattgaacaagtggtgaca
aaatctgtaaattccactggtagcagtggtcccaaaacttcatctccaagtcttgctgga
ctggctcgttcatcatcatggttagacatgcatgcaggtcacattcctttgacattcaga
actcctcctgtcagtcctccacgatcaagctacttaacaggaatgcgtagggtgtgttct
ttggagttcaggccgcaccttatgaattctccagattcaggattagctgatcctctttta
gcttctgttggatcttctggaggcacagagcggagtttgcttcctcagtcaactatctac
aattggagttgtggtcacttctcaaagccgcttctcaccacaccggatgatactgaagaa
atattagttagaagggaagaaagggaaaaatttgcactggaacatattgcaatgtgtcag
cactcttctgttagcaaccttaataacagaattgctagctgggatacaaagtttgaaact
ggtacaaagacagccttgctgcagcctttctctcctattgtggttgctgctgacgagaat
gaacgaattagggtgtggaattatgaggaagctacccttctgaatgggtttgataatcat
gattttcctgacagaggagtttcgaagctgtgtcttgtaaacgagctagatgacagtttg
ctccttgttgcttcatgtgatggaaatatacggatttggaaagactacactgtgaagggt
aagcaaaagcttgtcactgcattttcttcaatccaaggtcataaacctggtgtgcggagt
ttgaatgctgttgtggactggcaacaacaatctggatatctgtatgcttcgggtgagata
tcatccatcatgctttgggacctggataaagagcagcttattcattctattccttcatca
tcagattgtagcgtctcagcaatgtctgcttctcaagttcatggaggtcaatttactgct
ggttttgtggatggatctgtcaaactctatgatgtcagaacacctgaaatgcttgtttgt
gctactcggccgcacactgagaatgtagaaaaagttgtggggattggctttcatcctggg
cttgatcctggaaagattgtcagtgcatcccaggctggtgacatgaagttcctggatatg
agaaattatagagatccctatctcacgatcaaggcccacaggggctcactcacagcttta
gctgttcataggcatgcccctattattgccagtggatcggcaaaacaaattattaaatta
ttcagtctaaatggtgaaccattaggctccattagataccacctaaccataatggcccag
aagatcggtcctgtaagctgcctcaccttccatccttaccaggtactccttgctgctggt
gctactgatgctttattctcaatctacgccgatgacaacactcaagcaagatga
DBGET
integrated database retrieval system
