Populus trichocarpa (black cottonwood): 7468121
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Entry
7468121 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
7468121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7468121
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
7468121
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
HECT type E3
7468121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
7468121
NCBI-ProteinID:
XP_024465206
LinkDB
All DBs
Position
10:16040902..16055689
Genome browser
AA seq
1032 aa
AA seq
DB search
MFFNGDPSTRKRVDLGGRSSKERDRQKLLEQTRLERNRRLWVKQQNAAALKIQKWFRGRK
AVEAEQSTVREQFFGTYGKYCQNVDRHCFSPDSEFLRQLLFFFNAQNSDDFTILVETCRL
LLQNVRDSGDIVSLFAGVDYSTKHGLVDYRVKQLAFTCIWAIYQNRKQLKDQLVMVPRDS
SLTATLLLEAVVLLIDPKLPWACKVVGYLLQRNAFALFREIVLTGKENTKSDNSIRNASP
LERILALLISHIGQHPCICPNINPQWSFSSQMLTIPLLWRLFPSLKEVFATRGLSQHYIH
QMAQCVRNAYVLPNDVSVECPGYACLLGNTVETAGAALSHADCSFEMAMDLAAVTTFLLE
ALPPIKSSSPEIRQSSTMDEDDMALPDEMEIVLNKDLEQQIAHAMHSRFLLQLTSVLFRE
VSMVSGSNHGLDDKEVAAIGAVCAFLHVAFNTLPVDRMMTVLAFRTELVRVLWNFMKQCH
ENKKWPSLPEQLSYLPGDVPGWLLPLAVFCPVYKYMLMLVGNEEFYEQEKPLSLKDVRCL
IVILRQALWQLLWVNPTAHSNSVKLVKNTSAYNGNPVESIKQRVSLVASELLSQLQDWNN
RRQFAPPSDFHADGVDDSFISQAIIDGTKANDIMNRAPFLVPFTSRVKIFNSQLLAIRQR
QGSHGVFTRNRFRIRRDHILEDAYNQMSALSEEDLRGLIRVSFINEFGVEEAGIDGGGIF
KDFMENITRAAFDVQYGLFKETSDHLLYPNPGSGMTHEQHLQFFHFLGTLLAKAMFEGIL
VDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKRYQGDISDLELYFVIVNNEYGE
QTEEELLPGGRNQRVTNDNVIPFTHLVSNYRLNYQIRLQSSHFMRGFQQLIKKEWIDMFN
EHELQLLISGSLDSLDIDDLRSHTNYAGGYHSEHYVIEMFWEVMKGFSLENQKKFLKFVT
GCSRGPLLGFKYLEPLFCIQRAGGTASEEALDRLPTSATCMNLLKLPPYRSKEQLATKLL
YSINADAGFDLS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcaacggcgatccatcgacacggaagcgagtggatttaggaggtcggagttcg
aaggaaagagataggcagaagcttcttgaacaaactagattggaacggaatcgtaggttg
tgggtgaagcaacagaatgctgctgctctcaaaattcaaaaatggtttagagggagaaag
gcagtggaggctgaacagtctacggttcgagagcagttctttggaacctatgggaagtat
tgccaaaatgtagacaggcattgtttcagtccagattcagagttcctccggcagctgtta
tttttcttcaatgcacaaaatagtgatgatttcactatccttgtggagacttgccgattg
cttctgcaaaatgttcgagatagtggggacattgtgagcctatttgctggtgtggactat
tcaaccaagcatggtttggtggactatagggtcaagcaacttgcatttacctgtatttgg
gctatctatcaaaatagaaaacaattgaaggatcaacttgtgatggtgcccagggattca
agcctaacagcaactctcttgctggaagctgtagttttgctgatcgatcccaaacttcca
tgggcttgcaaggttgttggttatctcttgcaaaggaatgcattcgctctatttagagaa
attgtcctaacaggaaaggagaatacgaagagtgacaattccattagaaatgcatctcca
ttggagcgtattcttgcccttttgatatctcacattggtcagcatccgtgtatttgcccc
aacattaatccgcaatggagtttctcttctcagatgctgacaatccctttattatggaga
ctttttcctagtttaaaagaggtttttgcaactcgggggctgagccaacattacattcat
cagatggcacaatgtgtgcggaatgcctatgtcctgcccaatgatgtttctgtggaatgt
cctggttatgcctgtctcctaggaaatacggtagaaactgcaggagctgctttgtctcat
gctgactgttcctttgagatggctatggaccttgctgctgttacaacattcttgttggag
gcacttcctcctataaaatcgtcaagtccggaaattagacaaagttccactatggatgag
gatgatatggctttgcctgatgaaatggaaatagttttaaacaaggatttggaacaacag
atagcccatgctatgcattcccgctttctcttgcaattgacaagtgttttatttcgggag
gtttcaatggtcagtggttcaaaccatggactggatgacaaagaggttgcagctattggt
gctgtttgtgcctttttgcatgttgctttcaacaccttgccagtcgaccgaatgatgact
gtattggcatttagaactgaacttgttcgagtgctttggaattttatgaagcagtgtcat
gagaataagaagtggccatccttgcctgagcagttgtcatatctgccaggagatgtacct
ggctggctgttacctctggctgttttttgtcctgtatacaagtacatgcttatgttagtt
ggcaatgaggagttttatgagcaggagaagccattgtcattgaaggatgttcggtgtcta
attgttattttgagacaggccctatggcagctcctgtgggtgaatcctacagcacacagt
aattcagttaaacttgttaaaaacacttctgcttataacgggaaccctgttgaatctatt
aaacagagagttagtcttgtagcctctgaactcctctctcagttgcaagattggaataac
agacgacaatttgcaccacccagcgatttccatgctgatggcgttgatgattcattcatt
tctcaggctataatagatggaaccaaggcaaatgacattatgaatcgggctccttttttg
gtaccttttacaagcagagtaaaaatattcaattcacaattattggccattaggcaaaga
caaggatcccatggtgttttcacgagaaacagattcagaatacgacgggaccatattttg
gaagatgcttataatcagatgagtgcattgtctgaggaggatcttcgaggattgattcgt
gtatcatttattaatgagtttggagttgaggaagctggcattgatggtggtggcattttt
aaagatttcatggagaacattactcgagctgcctttgatgtgcaatacgggttgtttaag
gaaacatctgatcacctactctaccccaatcctggatcaggaatgacacatgaacaacat
ctccagttttttcatttccttggaactcttcttgcaaaggctatgttcgaaggtattctt
gttgatataccttttgcaacattcttcctaagcaaattaaaacagaagtacaactatttg
aatgacttgccttcactggatccagaattatatcgccaccttattttcctgaagcgttat
caaggtgatatttctgacttggagctctactttgtcattgtaaataatgaatatggcgag
caaacagaagaagagctgcttcctgggggacgaaaccaacgtgttactaatgacaatgtc
attccttttactcatcttgtatctaattatcgtctgaattatcagatacgtttgcaaagt
tctcatttcatgaggggctttcagcagcttataaagaaagaatggattgatatgtttaac
gagcatgaacttcagctcctgatatcaggttcacttgacagcttggatattgatgacctg
cgcagtcataccaattatgcgggtggttatcatagcgagcattatgttattgagatgttc
tgggaagttatgaaaggtttttcattggaaaaccaaaagaaatttctgaagtttgtgacc
ggttgctctcgaggacctttgcttggattcaagtatctggaacccttgttttgtatacag
agggccgggggtactgcttctgaggaagctcttgaccggttgccgacatcagctacttgc
atgaatcttctaaagcttccaccttatagaagcaaagagcagctagcaacgaaattgcta
tattctataaatgcggatgctggtttcgatttgagctga
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integrated database retrieval system
