Populus trichocarpa (black cottonwood): 7468129
Help
Entry
7468129 CDS
T01077
Name
(RefSeq) YTH domain-containing protein ECT4 isoform X2
KO
K20102
YTH domain-containing family protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7468129
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
7468129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
7468129
NCBI-ProteinID:
XP_002316068
UniProt:
B9HX84
LinkDB
All DBs
Position
10:complement(16184160..16188776)
Genome browser
AA seq
742 aa
AA seq
DB search
MDIYNVSGHENAETYLIQGAEINPILTSPVVEQVETMYNEGTPEFVAGQGLFYPAATNYG
YYCTGFETPVEWEDHQKIFGVDGPEIQYAGAQTESLPYVYYTPSYGHAQSPYNPYNPYIP
GAMVGIDGSYAGAQQYYTISPYQDPVSSPGYISVAVQPEVFPYGLAGPLVDNGIERSSRP
DGRSLKHGGSSSSAAFARNIPRPASNQTNSLYRISEGPKANVGPSKQPMTHGGVSSGSIL
TQTSSHVLQGRSASGPMHPSDKISNGKVQSHQNQLETSLPVNNGFSNFGSSAYGRTSVDK
LRSKTHDGRTLSDLNGNAELLGEQNRGPRTNKSKNQLAVKAYTAKVGDNNGLGNIVIQTD
QYNKDDFSTDYLDAKFFVIKSYSEDDVHKSIKYNVWSSTPHGNKKLQTAFEDAQKLAVGR
PRGCPIFLFFSVNASGQFCGVAEMIGPVDLHRDMDFWQQDKWSGSFLVKWHIIKDIPNSS
FRHIILENNENKPVTNSRDTQEIMYKQGLEMLKTFKNHPLRTSILDDFMYYENRQKIMQD
EKARLMFKSFRSPLFVPALNPAIELNGLVQQPPHKDERMKHNDLNNLKKTDGNKYEKIMN
PNDCNSWKKVETNKDEKIIDHDDLHSFKNTGTSAIEQLSSDSDVTISSRGKDSGQVTVDA
DDDIGSVLKIGSLDINPKQTESNSLLSAANKSADIVTVGSMPVKVNGMTESSGFLTVGTI
PLDPRSVQLDKDGAVGKQGSQY
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggatatatataatgtttctggacatgaaaatgcagaaacttatttgattcaaggtgct
gagataaaccccattttgacaagtccagttgttgagcaagttgaaaccatgtacaacgaa
ggaacccccgagtttgttgcaggtcagggcttgttttatcctgctgccaccaactatggt
tactactgtacaggatttgaaacacccgttgaatgggaggaccatcaaaagatttttggt
gtagatggtccagaaatccagtatgcgggtgcacaaactgaaagtttaccttatgtatat
tatacacctagctatggacatgcacagtctccatataacccttacaatccttacataccc
ggtgctatggtaggaattgatggatcgtatgctggggcacaacagtattacacaatctcc
ccttatcaggaccctgtatcgtcacctggttatatttctgttgctgttcaaccagaagtc
ttcccatatggtttggcaggtcctttggtagataatggcatagaacgcagtagtagacct
gatgggagaagtttaaagcatggcggttcttcatcatctgcagcctttgctagaaacatc
ccaagacctgcttcaaaccagactaattctttgtacaggatatctgaagggccaaaagct
aatgttggaccaagtaagcaaccaatgacacatggaggtgtttcttctggtagcattctt
actcaaacttcatcacatgtgcttcagggtagaagtgcttctggtcccatgcatccttct
gacaaaatttcaaatggcaaagttcaatctcatcaaaaccaattagaaaccagtctccct
gtcaacaatggattttctaattttggatcaagtgcttatggccgaacctcagtggataaa
cttcgatcgaagactcatgatggcagaactctcagtgatctgaatggaaatgcagagctg
ttgggtgagcagaaccggggacctaggacaaacaagtcaaaaaatcaactggcagttaaa
gcctacacagccaaagtgggagataataacgggctaggaaacattgttatacagactgat
cagtacaacaaggatgatttctcaactgattatttagatgcaaagttttttgtaataaaa
tcatatagtgaggatgatgtgcacaagagcatcaaatataatgtttggtcatccacacct
catggaaacaaaaagctgcagactgcatttgaagatgcacagaaactagctgtgggaaga
cctagaggctgccctatctttctgttcttttctgttaatgcaagtggtcaattctgtggt
gttgcagagatgattggcccggtggaccttcatagagatatggacttttggcagcaagat
aaatggagtgggagctttcttgtcaagtggcatattattaaagatataccaaactcaagc
tttaggcacatcatattggagaataatgagaacaagccagtaactaacagcagagacacc
caagagataatgtataagcaaggtttagagatgctgaaaacattcaaaaatcacccactt
aggacttctatacttgatgacttcatgtactatgagaatcgccagaaaattatgcaggac
gaaaaagccaggcttatgtttaaaagcttccgatctccattgttcgtacctgcattaaat
cctgccatcgagctaaatggtctcgtgcagcagccaccacacaaagatgagaggatgaag
cataatgatcttaacaacttgaagaaaactgatggaaacaaatatgaaaagattatgaat
ccaaatgattgcaacagctggaagaaagttgagacaaacaaagatgagaagattatagat
catgatgatcttcacagcttcaagaacactgggacctctgccatcgagcaactttcttca
gattcagatgttaccatttcaagcaggggcaaagattctgggcaagttacagtggatgca
gatgatgatattggatctgtgctaaagattggctcacttgatataaatccgaaacagact
gaatctaattccttgctgagtgctgctaacaaatctgctgacattgtcacagtaggatca
atgcctgttaaagttaatggaatgactgaatcttctggttttctaacagtgggtactatc
ccccttgatcctaggtctgtacaactggacaaagatggcgctgttggtaaacaggggtct
cagtactga
DBGET
integrated database retrieval system
