Populus trichocarpa (black cottonwood): 7468138
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Entry
7468138 CDS
T01077
Name
(RefSeq) truncated transcription factor CAULIFLOWER A isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7468138
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
7468138
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GFIT
Motif
Pfam:
K-box
SRF-TF
Spectrin_Anc-1_2
HypF_C
Motif
Other DBs
NCBI-GeneID:
7468138
NCBI-ProteinID:
XP_002316076
UniProt:
Q6IWY2
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Position
10:complement(16340628..16346399)
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AA seq
248 aa
AA seq
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MGRGRVQLKRIENKINRQVTFSKRRTGLLKKANEISVLCDAEVALIVFSHKGKLFEYSTD
DSMEKILERYERYSYAERQLVATDLDSQGNWTLEYNRLKAKVELLQRNHRNYLGEDLDSM
SLKELQNLEQQIDTALKHIRARKNHLMSQSISELQRKEKAIQVQNNMLVKQIKEKEKNDK
ALAQPAFWDLQDHGPNASSFLLSQPAGLPLPCLNIGGSHQEEAPEARRNELGHTLEPIYS
FHLGGYGA
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggggtagggttcagttgaagagaatagagaacaagatcaaccggcaggtaaca
ttttccaaaaggagaactggattgttgaagaaagctaatgaaatctcagtcctgtgtgac
gctgaggttgctttgattgtcttctctcacaaagggaagctctttgaatactccacagat
gattccatggaaaagatacttgaacgctacgagagatattcttatgcagagaggcaacta
gttgccactgatcttgattcacaggggaactggaccctggagtataacaggctcaaggca
aaggttgaacttctacagagaaaccataggaactatttgggggaggatctagactccatg
agtctcaaagagctacagaacttagagcaacagattgataccgcccttaaacacattcgg
gcgagaaaaaaccatctgatgagtcagtcgatttctgagctgcagagaaaggagaaggca
attcaagtgcaaaacaacatgttagtgaagcagatcaaggagaaggagaagaatgataaa
gcgctggcacaaccggcattctgggatctgcaagatcatggccctaatgcttcctcattc
cttttatcacagccggcaggcctgccactgccttgcttaaacatcggtggcagtcaccag
gaagaagctcctgaagcgaggaggaatgagcttggccatacgctggaaccaatttattct
tttcaccttggaggttacggagcatga
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