Populus trichocarpa (black cottonwood): 7468147
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Entry
7468147 CDS
T01077
Name
(RefSeq) nuclear transport factor 2 isoform X4
KO
K24983
Ras GTPase-activating protein-binding protein 2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7468147
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
7468147
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Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
DUF2382
Motif
Other DBs
NCBI-GeneID:
7468147
NCBI-ProteinID:
XP_002315000
UniProt:
B9HXI9
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Position
10:16458410..16464297
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AA seq
486 aa
AA seq
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MATQVDESTVKLDPKVVGNAFAEQYYNTLSKSPELLHNFYNDASLIGRPGSDGSVSPIST
LEEIKKLILSLDYKNCVVEIQTIDSQESYENGVMVLVTGFFAGKDSTSQNFTQAFFLVPQ
DDGRRYYVLNDIFRYMEESENKKIIDEDNIAPATPVIPCPEPASIPNHSVSANMSTTLEE
GDDQAKESGHPLDNGEIPTYEKEVVVEKVVTTQNDDQAKESGHPLDNGEIPTYEKEVVVE
KVVATQNDAHPVSEAVASSVQEEDAPKKSYASVANALNFKTQPFQQRVSPVKPVKQSHTA
VPPVVTSQQTGSRPPSNNSVEINNNSAAVEGYSIFVANLPLDATVDQLVQAFTRFGAIKP
NGVQVRSYKQEKNCFGFVEFESADSVEKAVEVSTVMIGTRTAHIERKNAKNGGEKYPSRK
GGFRNGNFRSRGNLNGGHGYGRNDFENQGGVSGQSWGTTGRNGEANKKVYLNGEARGPRQ
ARAENN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcaggtggatgaatctaccgtcaaacttgatccaaaagtggtggggaatgct
tttgcggagcagtactacaacaccttgtccaagtctcccgagctgcttcataacttttac
aatgatgcgagcttgattggcaggccaggctcagatggttcagtgtctcctatttcaact
ttagaagagattaaaaaattgatcctctctcttgactataagaattgtgtagtcgagata
cagactattgattctcaggaatcttatgagaatggggtaatggtgttggttactggtttc
tttgctggaaaggacagtaccagtcaaaactttacacaagcatttttcttggtcccgcaa
gatgatgggaggagatattatgttttgaatgatatttttagatacatggaagaatcagag
aataagaaaattattgatgaagacaacattgctccagctacacctgttatcccatgtcct
gagccagcctccattcctaatcactctgtctctgccaatatgtctaccactttggaggag
ggtgatgatcaagctaaagaatccggtcatcctttggacaatggagagattcccacttat
gagaaggaggtggttgtcgagaaagttgttaccactcagaatgacgatcaagctaaagaa
tccggccatcctttggacaatggagagattcccacttatgagaaggaggtggttgtcgag
aaagttgttgccactcagaatgatgctcacccagtttctgaggcagttgcttctagtgtc
caggaggaggatgcccccaagaagtcctatgcatcagtggcaaatgcattgaatttcaaa
acacaaccatttcaacagagggtatcacccgtgaaacctgtgaaacagtcacatacagct
gtaccacctgtggtcacttctcaacaaacaggttctcgccctcccagcaacaattctgtg
gaaatcaataacaacagtgctgcagttgagggttactccatatttgttgcaaatttgcct
ctggatgctactgttgaccagcttgtgcaggcttttacaagatttggggctattaaacct
aatggtgtgcaagtcagaagttataagcaagaaaagaactgttttggttttgtggaattt
gaatcagctgattctgtggagaaggccgttgaggtctctactgtcatgattggcactcga
acagcgcatattgagagaaagaatgcaaaaaatggtggtgaaaagtatccttcaagaaag
ggtggttttaggaatggcaattttaggagccgtggaaacttaaatggaggccatggctat
ggcagaaatgattttgagaatcagggtggagtctctggtcaatcttggggcacaactgga
cgcaatggagaagctaacaagaaagtttatctaaatggggaagctagaggtccccgtcaa
gctcgggctgagaataactag
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