Populus trichocarpa (black cottonwood): 7468418
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Entry
7468418 CDS
T01077
Name
(RefSeq) auxin response factor 18
KO
K14486
auxin response factor
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7468418
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
7468418
NCBI-ProteinID:
XP_002316370
UniProt:
A0A2I4KKA0
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Position
10:complement(20749545..20753176)
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AA seq
706 aa
AA seq
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MFEAKLRDCSSQILQIPKLQSGPMIREFAVMNSQKEKMRVAEKCLDSQLWHACAGSMVQM
PAVNSKVFYFPQGHAEHAQGSVEFGHFQIPALIPCKVSAIKYMADPETDEVYAKIRLIPL
NNSDLMLGHGCGEDNDDRLHSGNESQEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPR
LDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLR
AENGDLCVGIRRAKRGIGGNECSSGWNSFAGYSGFFREDESKLMRRNGNGDMKGKVKAES
VIEAASLAANGQPFEAVYYPRASTPEFCVKASAVRSAIQIQWCPGMRFKMAFETEDSSRI
SWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPDLLHNVKRVSPWLVELVSNMPAIHLSP
FSPPRKKLRLPQPPDFPLLGQIPMPSFTGNPLRSNSPLCCVSDNIPAGIQGARHAQFGLS
SSDLHFNKLQAGLFPVDFQRLDRAAPPSRISNSNFVGNTQNSESISCLLTMGNSSQGMKG
SDTKTPHILLFGQLIVTDQQSSQSCSGDTNANSSSDGHPGKAISDGSGSASQQNGPLENS
SGGRCPWYKDYQKTDPGLETGHCKVFMESEDVGRTLDLSVLGSYEELHRKLVNMFGIESS
EMLSNVLYRNAAGATKHAGDEPFSEFLKTARRLTILSDASSDNVGR
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggcaaagctaagagactgttcttcccaaattctacaaatcccaaaactacag
agtggtccaatgattagggaatttgcagttatgaattcccagaaggaaaaaatgagagtg
gcagaaaaatgtttagattcacaattatggcatgcttgtgcaggtagcatggttcaaatg
ccagcagttaactcaaaagttttctactttccacagggtcatgcagaacatgctcaaggg
agtgtagaatttggtcacttccagattcctgcactaatcccttgtaaggtatctgctatt
aagtacatggcagatcctgaaaccgatgaggtttatgccaaaattaggctaatcccactg
aataatagcgatttaatgcttggacatggttgtggtgaggataatgatgataggttgcac
agtgggaatgagtctcaagagaagcctgcttcttttgctaagacattgactcaatctgat
gctaataacggtggtggtttctctgtgccacgttattgcgccgagactatattcccaaga
ttggattacactgctgagcctcctgtgcagaccattcttgctaaggatgtgcacggagag
acctggaagtttaggcatatctatagagggacgcctcgtcgccatttgttgactactgga
tggagtaattttgtgaaccaaaagaaacttgtggctggggactctattgtgtttttgaga
gcagagaacggggacctttgtgttggaattagacgtgctaagagagggattggtggaaat
gaatgctcatcagggtggaattcatttgcgggctattctgggttttttagggaagatgag
agtaaattgatgaggaggaatggcaatggggatatgaaggggaaagtgaaggctgagtct
gttattgaagctgcatctcttgcagccaatgggcagccttttgaagctgtctattatcca
agagcgagtactccagaattttgtgtaaaggcctcagctgtgaggagtgcaatacagatt
cagtggtgtccagggatgaggttcaaaatggcttttgagactgaggattcgtctcggatt
agctggttcatgggaactatatcttctgttcaggttgctgaccccatccgctggcccaat
tctccctggcggcttctgcaggtagcatgggatgagccagatctactccataatgtaaag
cgtgtgagcccatggttggttgaattggtatcaaacatgccagccatccacctatcaccc
ttctcacccccaagaaagaagttgagacttccacagcccccggattttcccttacttggt
caaatcccaatgccgtcatttactggcaaccctcttagatcgaacagtcccttatgctgt
gtctcagataacattcctgcaggcatacagggagccaggcatgctcaatttggactatct
tcttcggatctccacttcaacaaactgcaggcgggactgttcccggttgattttcagcgg
cttgatcgtgctgcccctccttctagaatctccaatagtaacttcgttggcaatactcaa
aacagcgagagtatttcttgcttgctgacaatgggaaattcctcacagggtatgaagggc
agtgacacaaagacaccccacattttattgtttggtcagcttattgtcaccgatcagcag
agttctcaaagctgctcgggtgatacaaatgcaaacagttcatcagatggacatccaggg
aaggcaatttcagatggttctggttctgcatcacaacagaatggtccgctggaaaattct
tcaggtgggaggtgtccttggtacaaagattaccaaaaaactgatcctggcctggagacc
ggtcattgcaaggtgttcatggaatcagaggatgtgggtcgaacccttgacctatcagtc
cttggttcatatgaagagctgcacagaaagttggttaatatgtttggcattgagagctca
gagatgctgagcaatgtgctttaccggaatgcagctggcgccaccaagcacgctggagat
gaaccctttagtgagtttttgaagacagctagaaggttaacgattctttcagatgcaagt
agcgacaacgtaggaagatag
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