Populus trichocarpa (black cottonwood): 7468437
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Entry
7468437 CDS
T01077
Name
(RefSeq) exocyst complex component SEC8 isoform X1
KO
K06111
exocyst complex component 4
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7468437
Membrane trafficking [BR:
pop04131
]
Exocytosis
Tethering complex
Exocyst complex
7468437
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec8_N
Vps54_N
EXOC6_Sec15_N
Sec8_C
Motif
Other DBs
NCBI-GeneID:
7468437
NCBI-ProteinID:
XP_024466282
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All DBs
Position
10:complement(21048690..21063529)
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AA seq
1051 aa
AA seq
DB search
MGIFDGLPVPPDKAYLREELSRIDESWAAARFDSLPHVVHILTSKDREAEAQVLKEQSDV
VEDVVDEVVQSYHSGFNKAIQNYSQILRLFSESAESIASLKVDLAEAKKRLGTRNKQLHQ
LWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAEKQFYAAVQLHAHSSLMLEREGLQMVG
ALQDVRSELTKLRGVVFYKILEDLHAHLYNKGEYSSVASSMYERDDELPTTIAVFTMSNS
QSLSRRTRLMKGDNHSFADGSYKPSSIDGGSSFDGHDEDLDITDEATSDGHTASVRTNGG
DGNMKDIKVGSRQIPSWLSNSTPDEFIETIKKSDAPLHVKYLQTMVECLCMLGKVAAAGA
IICQRLRPTIHDIITSKIKSHSELVNSSRSSINQSAQTRGLHFVKGQLESYKLPKQKRQN
GTLLAVSPVSPVMAPTGKAQAAAKELLDSILDTVIRIFENHVVVGELLEFKTSQNVDLNA
PGSLTTDLNWNLDSEASQVIGGYSIGFSLTVLQSECQQLICEILRATPEAASADASVQTA
RLASKAPSKGKKDGSEDGLSFAFRFTDATISIPNQGGVDLIRQGWSRKGPNVLQEGYGSA
AVLPELGIYLAASVYRPVLQFTDKLASMLPKNYSQFGNDGLLAFVENFVKDHFLPTMFVD
YRKGVQQAISSPAAFRPRAHTVAPYTPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFA
GDLVKFVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIEKLMRFDPASAYLPNSLGQS
SMVNNASGAESIEIELELSEILLNLRPIKQENLIRDDNKLILLASLSDSLEYVADSIERL
GQITSRSSNQVADKAKTLAAFADDYRKLAIDCLKVLHVEMKLETIFHMQEMTNREYLEDQ
DAEEPDDFVIALTAQITRRDEEMAPFVAAVKQNYIFGGICSIAANASIKALADMKSINLF
GVQQICRNSIALEQALAAIPSMDSEAVQQRLDHVRTYYELLNMPFEALLAFITEHENLFT
PAEYANLLKVNVLGREIPPDAQDRVSYILSH
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgggaatttttgatgggttgcccgttcctcctgacaaagcatatttaagagaagagctt
tcaagaatagatgagagttgggctgctgcacgttttgactcattgcctcatgttgtccat
atcttaacctctaaagatcgtgaagctgaagcccaagttttgaaggagcaaagcgatgtt
gttgaggatgtcgtagatgaagttgtacaatcttatcacagtggcttcaacaaagcaatt
caaaactattctcagatcttgcggttattcagtgaatctgctgagagtattgcttcacta
aaggttgatttagctgaagcaaagaaacgtcttggtacccggaataagcaattgcatcag
ttgtggtatcgatctgttacactacgacacataatctctcttttagatcaaattgaaggc
atagctaaggttccagctcgtattgagaaactcatagcagaaaagcagttttatgcagca
gttcaattgcacgctcactcatcattgatgcttgagcgagaaggtcttcaaatggttggt
gctcttcaagatgtgcgatctgagctgacaaagctgcgaggagttgtcttctataaaatt
ttggaggatttgcatgcacatctttacaacaagggagaatacagctcagttgcctcaagc
atgtatgaaagagatgatgaattgccgactaccatagctgtttttactatgagcaattca
caatctctatctcgaagaacaaggttgatgaaaggtgacaatcatagctttgctgatgga
tcatacaagccaagctctatcgatggaggttcttcatttgatggtcatgatgaggatctt
gatataactgatgaggcaacctcagatgggcacactgcatcagtgagaacaaatggaggt
gatgggaacatgaaggacattaaagttggttctcgtcaaataccaagttggctttcaaat
tctactcccgatgaatttattgaaaccattaaaaagagtgatgctccacttcatgtgaag
tatttgcagaccatggttgagtgtctctgcatgctgggcaaagttgcagctgctggtgca
ataatatgccaaaggttgcgacctacaattcatgacatcatcacttccaagataaaatct
cattcagaacttgtcaactcttcaaggtctagcatcaatcaatctgcccaaaccagaggt
cttcattttgtgaaaggacaactagaaagctacaagttgccaaaacagaaacgtcagaat
ggaacactattggctgtaagcccagtctcgccagtgatggctcccacagggaaagcacag
gctgctgcaaaagagcttcttgattcaattttggacactgttattcgaatatttgagaat
catgttgttgttggagagcttttggagtttaaaacttctcagaatgttgacttgaacgcg
ccagggtcgttgacaacagatttaaattggaacctggattctgaagcatctcaagttatt
ggaggttacagtattggtttttccttgacagttttacagagtgaatgccaacaactcata
tgtgaaattctgagagccactcctgaagctgcatctgcagatgcttctgtacaaactgct
agactggcaagcaaggctccttcaaagggaaaaaaggatgggtcagaagatgggctctcc
tttgcttttcgcttcacggatgctacaatatccattcctaaccaaggtggtgttgatctc
attcgtcaaggatggagcaggaagggtccaaatgtgctccaagaaggctatgggtctgct
gctgtcttgcctgagctaggcatatatctagcagcatctgtataccgtcctgttcttcag
tttacagataagcttgcttcaatgctgccaaaaaattattcccagtttgggaatgatggc
ttgctagcttttgtggaaaacttcgtaaaagatcattttttaccaacaatgtttgtggat
taccggaagggtgtacagcaggctatatcaagtccagctgcatttcgtccgagggcccat
actgttgctccttatacaccatcaattgagaaaggtcgaccagtcttgcagggacttttg
gcaatcgatttcttggcaaaagaggtgcttggttgggctcaagcaatgcccaaatttgct
ggtgaccttgtaaagttcgttcaaactttcctcgagcgaacatatgaaagatgtcggaca
tcatatatggaggcagttcttgagaagcagagttacatgctgattggaaggcatgatatt
gagaaactgatgcgatttgacccagcaagtgcatatttaccgaattcacttggtcaatca
agcatggtaaacaatgcctctggtgctgaatctatagagattgaattggagttgagtgaa
atattactcaatctgcgacctatcaagcaggaaaatctaattcgtgatgataacaaactt
attttgcttgcttcccttagtgattcactcgagtacgttgcagactcaattgaaaggctt
gggcaaataacctcacgatcatcaaatcaagtagcagataaagccaagactctggcagca
tttgctgatgattatagaaaattggcaattgactgcctaaaggttttgcatgtagagatg
aagttggaaacaatattccatatgcaggaaatgacaaacagggagtacttggaggaccaa
gatgcagaagagccagatgactttgtcattgctctcactgcacagataacacgtagagac
gaggaaatggcaccttttgttgcagcagtgaagcagaattacatatttggtggaatttgt
agtattgcagcaaatgcatctatcaaggctttggctgacatgaagtccattaatcttttt
ggagttcaacaaatttgccggaattcaattgcattggaacaggcccttgcagctatccca
tcgatggatagcgaagctgtgcagcagagattagatcatgtccgaacatattatgaacta
ttaaacatgccatttgaggccttactagctttcatcaccgaacatgagaacttgtttaca
cccgcagagtatgccaatcttctgaaggtgaacgtcctaggaagggaaatcccaccagat
gcgcaggatcgagtctcatacattttatcccattaa
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