Populus trichocarpa (black cottonwood): 7468504
Help
Entry
7468504 CDS
T01077
Name
(RefSeq) autophagy-related protein 8C-like
KO
K08341
GABA(A) receptor-associated protein
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
7468504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7468504
04121 Ubiquitin system [BR:
pop04121
]
7468504
03029 Mitochondrial biogenesis [BR:
pop03029
]
7468504
Membrane trafficking [BR:
pop04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
7468504
Ubiquitin system [BR:
pop04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
7468504
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
7468504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
DUF2201
Motif
Other DBs
NCBI-GeneID:
7468504
NCBI-ProteinID:
XP_002320465
LinkDB
All DBs
Position
14:10825105..10826791
Genome browser
AA seq
119 aa
AA seq
DB search
MAKSSFKMEHPLERRQAEAARIREKYPDRIPVIVERAEKSDVPDIDKKKYLVPADLTVGQ
FVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMSYSGENTFGVY
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaagctcgttcaagatggaacatcctctcgaaaggaggcaggcagaagctgct
cgcatcagagaaaaatatcctgatagaattcctgtgattgtggaaagggctgagaagagt
gatgtccctgacattgacaagaaaaaatatttggttcctgctgatctcactgttggccaa
ttcgtgtacgtggtccgaaaaaggatcaagctcagtccagagaaggctattttcatcttc
gtgaagaacattctaccaccaactgctgccatgatgtcagcaatatatgaggaaaacaag
gatgaagatgggttcctttacatgagctacagtggtgagaacacatttggggtctattga
DBGET
integrated database retrieval system
