Populus trichocarpa (black cottonwood): 7468563
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Entry
7468563 CDS
T01077
Name
(RefSeq) agamous-like MADS-box protein AGL29
KO
K12412
pheromone receptor transcription factor
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7468563
03021 Transcription machinery [BR:
pop03021
]
7468563
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Yeast regulators
7468563
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
7468563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
B277
FTO_CTD
CENP-Q
DUF7201
Motif
Other DBs
NCBI-GeneID:
7468563
NCBI-ProteinID:
XP_002313380
UniProt:
B9HP41
LinkDB
All DBs
Position
9:complement(5199603..5200455)
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AA seq
201 aa
AA seq
DB search
MEAKKTRGRQKVEMKRIVNEDDRLVTFSKRRSGIYKKLSELITLTGTEAAFLVFSPGGKP
FSFGHPSIENVLDRFLENPSNADGTHELVEEYRRARIEELTQKYDEMQQQLDDDKEKGSK
LKDKIQGNERGDWWNAPVEELNLQELIELEKKFEGLRMTLHSKMKDSSNGASSSHAPEVG
NRSASHANDSNVASHGSNWGV
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggaagccaagaaaacaagaggaaggcaaaaggtggaaatgaagagaattgtaaatgaa
gatgatagattagtcactttctcaaagcgtagatccgggatctacaaaaaactgagcgag
cttatcactttaaccgggacagaagctgcattcctcgttttttcacctggtggtaagccg
ttttcattcggccacccttcaattgaaaatgtgcttgatcgttttcttgagaatccatcg
aacgcagatggcacccacgaacttgtggaggagtataggagggcgaggatcgaagagcta
acacaaaagtatgatgaaatgcaacagcagttggatgacgataaggaaaaaggcagcaag
ttgaaggataaaatacaaggtaatgagagaggggattggtggaatgctccagtcgaagag
ctcaacctccaagagttgattgaattggagaagaagttcgaaggcttacgaatgacctta
cacagcaagatgaaagacagcagtaatggtgcatcctcttcacatgctccagaagtaggc
aaccggtcagcatctcatgcaaatgattcaaacgttgcctctcatggaagtaattggggc
gtgtga
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integrated database retrieval system
