Populus trichocarpa (black cottonwood): 7468635
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Entry
7468635 CDS
T01077
Name
(RefSeq) phospholipase D alpha 1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00564
Glycerophospholipid metabolism
pop00565
Ether lipid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
7468635
00565 Ether lipid metabolism
7468635
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7468635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7468635
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
7468635
Membrane trafficking [BR:
pop04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
7468635
Endosome - Golgi transport
Others
Others
7468635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
PLDc
C2
PLDc_2
Motif
Other DBs
NCBI-GeneID:
7468635
NCBI-ProteinID:
XP_002308663
LinkDB
All DBs
Position
6:25171243..25179347
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AA seq
819 aa
AA seq
DB search
MTPRLLHGTLDVTVYGVDNLQYGCGFSLLKTEGFLKFGKRCLVNVKRSMSCLSENVVGSR
LYATVDLDKARVARTRMVGNEPHNPRWNESFHVYCAHSISHVVFTIKDDDAIGATLIGRA
YLPVEDITNGNILERWVEVEDEDRKPIPGGSRVHIKLQFFDVNQDRHWSQGIKSPQYEGV
PYVFFNQRQGCRVTLYQDAHVPDSFSPKISLAGKLYEAHRCWEDIFDAISDAKHLIYITG
WSVYTEITLIRDPNRRKPGGELKLGELLKKKAEEGVTVLMLVWDDRTSVLDFKKDGLMAT
HDEETEKYFRGSKVHCILCPRNPDVGRSVIQGFQVSTMFTHHQKTVVVDSEMLDTVSGKR
GIVSFIGGIDLCDGRYDTQDHPLFKTLDSVHYDDFHQPNFTGSSIKKGGPREPWHDIHCK
LEGPVAWDVLYNFEQRWTKQVGDKLLISQKQLEATTVRPLPVLQPNDTETWNVQLFRSID
DGAVVGFPQKPDKAAAAGLVSGKNSVIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFGW
KSTDINVPDIAALHLIPKELSLKIVSKIEAGERFTVYIVIPMWPEGLPESGSVQAILDWQ
RRTMDMMYSDITEALVKKGLNTDPREYLAFFCLGNRETKKIGEYAPPEEPEPDTDYSRAR
QARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGSRDSEIAMGGYQPHHLATSQPARGQ
IYGFRMALWYEHLGMLDPSFQHPESVQCIQLVNQVANENWEKYASETLEQDLMSHLLRYP
IQVGNNGIVTTLPGVNHFPDTKANVLGTKSDYFPPILTT
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgacgccacgattgcttcatgggacacttgatgtaacagtatatggggttgataatctg
caatatggatgtggattcagtttgttgaagacggagggatttctgaagtttgggaagcga
tgtctagtcaatgtaaaaagatcaatgtcttgcctatcggagaatgttgttggttctaga
ctctatgcaacagtagatttggacaaggcaagagttgcaaggaccagaatggtaggaaat
gagcctcataatccccggtggaatgagtccttccacgtatactgtgcccattcaatctca
catgttgtattcacaatcaaagatgacgacgctattggggcaacattgattggaagagct
tatcttccagttgaggatatcactaacgggaacatactcgaacgatgggttgaagtagag
gatgaagatcgtaaacctataccaggaggttctagagtccacatcaagctgcaattcttt
gatgttaaccaagacaggcattggtctcagggaatcaaaagtccgcaatacgagggtgtt
ccctacgtgttcttcaatcaacgacaaggttgccgggttactttatatcaagatgctcat
gttccagacagtttttccccaaagatttctttggcaggaaagctttatgaagctcacaga
tgctgggaggacatctttgatgccataagcgatgcaaaacacctaatttacataactgga
tggtctgtgtatactgaaattaccttgataagggatcccaatagacgaaaaccgggaggt
gaacttaaactcggggagctgcttaaaaaaaaggctgaagaaggtgtgacagttcttatg
cttgtttgggatgaccgaacttctgttttggattttaagaaggatggactcatggcaacc
cacgatgaagaaactgaaaagtacttcaggggctccaaggtgcattgcattttgtgccct
cgcaatcccgatgttggcagaagcgtgattcagggctttcaagtctccaccatgtttact
caccaccaaaagacagtagttgttgattccgaaatgcttgatactgtatctggaaagagg
gggattgtgagtttcattggaggcattgatctttgtgatgggaggtatgatacacaagac
catcccttattcaagactctggactcagtccattatgatgatttccaccagcctaacttt
acaggctcctcaatcaagaaaggtggtccaagagaaccttggcatgatattcattgcaaa
ttagagggacctgtggcatgggatgtcctttacaattttgagcaaaggtggacgaagcaa
gttggggataaacttctaatctcacaaaaacagcttgaagcaactacagttcgcccattg
ccagtgttgcagccaaatgacactgaaacatggaatgttcagctattccgttctattgat
gatggagctgttgttggctttccacagaaacctgacaaagcagctgcagcaggccttgtt
agtgggaagaacagcgtcattgaccgaagcattcaagatgcttatatcaatgccattagg
agggccaagaattttatttacatcgaaaatcagtatttccttggaagctcatttggctgg
aagtcaacagatatcaatgtcccggatatcgccgccttgcatcttataccaaaggagcta
tcacttaagatagtcagcaagattgaggcaggagaaaggtttactgtctatattgtgatc
ccaatgtggccagaaggtctacctgagagtggctctgtccaagcaatattagattggcag
agaagaacaatggacatgatgtattctgatatcactgaagcactcgtgaaaaaggggctc
aacacagatcctagggagtatttggcatttttctgccttggaaaccgagagactaagaaa
attggagaatatgcacctccagaggaaccagagcctgatactgattatagtagagctcgg
caggcccgtcgcttcatgatctacgttcatgcaaagatgatgatcgttgatgatgagtat
ataatcattggatcggcaaacatcaaccagagatcaatggatgggtctcgagattctgag
attgcaatgggaggataccaaccacatcatttggcaactagccagccagcaaggggtcag
atatacggttttcgaatggcattatggtatgagcaccttggaatgcttgacccttccttc
caacaccctgaaagtgttcaatgtatccagctagtgaatcaagttgccaatgaaaactgg
gagaaatacgccagcgaaactctcgaacaggatctgatgtctcacctgctcaggtatccc
attcaagttggtaacaatggaattgttacaactttaccaggggttaatcatttccctgac
accaaggctaatgtcctgggcaccaaatctgactacttccctccaatcctcaccacctag
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