Populus trichocarpa (black cottonwood): 7468838
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Entry
7468838 CDS
T01077
Name
(RefSeq) AP-1 complex subunit gamma-2
KO
K12391
AP-1 complex subunit gamma-1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
7468838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7468838
Membrane trafficking [BR:
pop04131
]
Endosome - Golgi transport
Others
AP-1 complex
7468838
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Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
HEAT_GCN1
HEAT_2
Sol_i_2
Motif
Other DBs
NCBI-GeneID:
7468838
NCBI-ProteinID:
XP_024443482
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All DBs
Position
16:complement(10764920..10780674)
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AA seq
877 aa
AA seq
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MNPFSSGTRLRDMIRAIRACKTAAEERAVVRKECAAIRTSMNENDQDYRHRNLAKLMFIH
MLGYPTHFGQMECLKLIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHSNQY
IVGLALCALGNICSAEMARDLAPEVERLLQFRDPNVRKKAALCTIRIIKKVPDLSENFIN
PAAALLKEKHHGVLITGIQLCTDLCKVSPEALEFLRKKHTDGLVKTLKDAVNSPYTPEYD
ISGIADPFLHIRLLKLLRVLGQGDADASDAMNDILAQVATKTESNKNAGNAILYECVETI
MSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAITVDAQAVQRHRATILECVKD
SDASIQKRALELVYVLVNETNVKPLTKELIDYLEVSDQEFKGELTAKICSIIEKFSPENN
WYIDQMLKVLNKAGNFVKDEVWHALIAVISSASDLHGYTVRALYKAFQTSSEQESLVRVA
VWCIGEYGDMLVNNVGMLDIEDPITVTESDTVDVVKIAIKHHALDLTTKAMALIALLKLS
SRFPSCSERIKDIIVQHKGSFVLELQQRSLEFNSIIEKHHNIRSALVERMPILDDATFST
RRAGSLPAAASTSGGASLNLPNGVVKPSAAPLVDLLDLSDDLPAPSSSGGDFLQDLLGVD
LSPAPTQSGIGHIQKAGTDVLLDLLSIGTPVQSSSPTTDILSSSQNDKSPIATLDALSSP
SSLSAQATSSARAAPMMDLLDGFGPSPPKPEDNGSVYPPLVAFQSSSLRITFNFSKQPGN
PQTTLIQATFTNLTPNVFTDFIFQAAVPKFLQLHLDPASSNILPASGNGAITQNLRVTNS
QHGKKSLVMRTRMSYKFDNKVTLEEGQINNFPQDLGS
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttctcctccggtacgcgtctaagggacatgattcgggcaatacgggcatgc
aaaacggcggcggaggaaagggctgttgtaaggaaagaatgtgctgcaattcgcacgtcg
atgaatgaaaacgatcaagattataggcaccggaatctggcaaagcttatgtttattcat
atgcttggctatccaacacattttggtcaaatggagtgcttaaagttgattgcgtccgcc
ggattcccggagaagagaatcggatatcttggcctcatgttgcttcttgatgaaagacaa
gaagttctaatgcttgttaccaactcgctaaaacaagatcttaatcattcgaaccagtat
atcgtgggactagcactttgtgctttgggaaatatttgttcagcagaaatggctcgtgat
cttgcaccggaagtggaaagattactgcaatttcgggatccgaatgttcggaaaaaagca
gcattatgtactatacggattataaagaaagtcccggatctgtcagaaaatttcataaat
cccgctgctgccttgcttaaagagaagcatcatggagtcttaataacgggaattcaactt
tgtacagatctatgtaaagtcagtccagaagcccttgagtttttgagaaagaagcacaca
gatgggttggtcaaaacattaaaggatgctgtgaacagtccatacacaccagaatatgac
atttctggcattgcggaccctttcctccatatcagattgcttaagcttttgcgcgtgtta
ggacaaggagatgctgatgctagtgatgctatgaatgacatacttgcgcaggtggcaaca
aaaacagagtcaaacaaaaatgctggaaatgctattctatatgaatgtgttgaaactatc
atgagcattgaagataatggtggcttacgagtgcttgctattaatatcctaggaagattc
ttgtctaaccgcgacaataacatcagatatgttgcattaaacatgctgatgaaggctatt
actgtagatgctcaagctgtacaaaggcatcgggcaacaatcttggaatgtgtaaaggat
tcagatgcatcaatccagaaaagggcccttgaacttgtttacgttctggtgaatgagacc
aatgtaaagcctttaacaaaagagctaattgattatctggaagtaagtgatcaagaattt
aagggggagcttactgccaaaatttgttccatcattgaaaagttctcccctgaaaataat
tggtacattgatcagatgctcaaagttcttaacaaggctggaaactttgtaaaagatgaa
gtatggcatgcccttattgctgtgatcagcagtgcctctgaccttcatggatatacagtc
agggcattatacaaagctttccaaacatcttctgaacaggaaagccttgttcgcgttgca
gtttggtgcattggagaatatggtgacatgttggtcaataatgtcggaatgcttgacata
gaggatcccataactgttactgagtctgacactgtggatgttgtcaagattgctataaaa
catcatgccttggacctcactactaaagcaatggctctaatagctctcttaaagctttct
tcccgtttcccatcttgttctgagaggatcaaagatataattgttcaacataaaggcagc
tttgtacttgaattgcagcaaagatcccttgaatttaattccattatcgagaagcatcat
aatataagatctgcgctggttgaaaggatgccaattttggatgacgctactttcagtaca
aggagagctggttcgttgccagcagctgcttcaacttccggtggggcttcccttaatctt
ccaaatggtgttgtgaagccctctgcagctcctcttgtggatttacttgatctttcagat
gaccttccagcacccagctcttctggtggtgattttcttcaggatcttctaggtgttgat
ttgtctccagctccaacacagtcaggcataggccacattcagaaagctggcacagatgtt
ctactagatcttttgtcaattggaacccctgtacaaagcagctcacctacaactgacatt
ttatcatccagtcaaaatgacaaatcaccaattgccacactagatgctctctcatcaccc
tcttcactctctgcacaagcaacatcttctgctagagctgctccaatgatggatttgctg
gatggctttggtcccagcccaccgaagcctgaggataatggttcagtttatccacctttg
gtcgcatttcagagcagctctttgagaataacattcaacttctcaaagcaaccaggaaac
ccgcaaacaacattaatccaggcaactttcacaaacttgacacctaatgtcttcacagat
tttattttccaggcagcagttccaaagtttcttcaactgcacttggacccagctagcagc
aatattctacctgcaagtggtaatggagccatcacgcaaaatttgagagttactaacagc
caacatgggaagaaatccctcgtgatgcgcacgaggatgtcatacaagtttgacaacaaa
gttacgttggaggaaggacagatcaacaatttcccccaggatttgggaagttag
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