Populus trichocarpa (black cottonwood): 7468855
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Entry
7468855 CDS
T01077
Name
(RefSeq) phospholipase D delta
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00564
Glycerophospholipid metabolism
pop00565
Ether lipid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
7468855
00565 Ether lipid metabolism
7468855
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7468855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7468855
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
7468855
Membrane trafficking [BR:
pop04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
7468855
Endosome - Golgi transport
Others
Others
7468855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
C2
PLDc
PLDc_2
Motif
Other DBs
NCBI-GeneID:
7468855
NCBI-ProteinID:
XP_024457238
LinkDB
All DBs
Position
5:7602962..7609774
Genome browser
AA seq
873 aa
AA seq
DB search
MAESSSHNHLIYLHGDLDLLIVEARSLPNMDVISKNFRQCFNVCIPSSATTTTTKSIDHH
DRDHRHHRDRDHRHHSDADKKIHHRHIITSDAYVTVTVPQVTLARTRVLKNAATPVWEQR
FNIPLAHPVKDIEFHVKDNDLFGAELIGTVKIPASTVLSGEFIQGWFPIIAASGKPPKPD
TALYLELKFTPFEKNPLYQNGFGGDPVVNGVRGTYFPVRKGGHVTLYQDAHVKDHDLPEI
EIDGGKVFKQERCWEDICYAISEAHHMIYIVGWSVFYKIKLVREPTRPLPRGGNLTLGEL
LKYKSEEGVRVLLLVWDDRTSHDKFGIKTAGVMATHDEETRRFFKHSSVTCVLAPRYASS
KLSFLKQQIVGTMFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPGHRLFHDLN
TVFQDDFHNPTFPALTKAPRQPWHDLHCKIDGPAAYDALINFEQRWRKATKWTELGLRFK
RKSHWSDDSLIKIERISWILSPHLSETKDGTTIVPPDDPTVYVSSEEGPENWHVQIFRSI
DSGSLKGFPKTIDECQDQNLVVAKDLVVDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYA
WPSYKDAGADNLIPMELALKIVSKIRAKERFAVYVVIPLWPEGDPKTNTVQEILFWQSQT
MQAMYEKIAQELKSMNLVDSHPQDYLNFYCIGKREEIPQELSSANGGTVSESFKSQRFMI
YVHAKGMVVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPRHTWAARKKHPRGQIYGYR
MSLWVEHLGEIDELFMEPEDLHCVKKVNKIAEDNWRKFTDPNFKLLQGHLLKYPLLVDAD
GKVCPLPGHENFPDVGGKVLGAHSTTLPDVLTT
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggctgagagctccagtcacaaccacctcatctaccttcacggtgacctggacttgctc
atagttgaagccagatctttacccaacatggatgttatctccaagaacttccgccagtgc
ttcaatgtttgcatcccttcttccgccaccaccaccaccaccaaatccatcgaccaccat
gaccgcgaccaccgccaccaccgtgaccgcgaccaccgccaccacagtgatgccgacaag
aagatccaccaccgtcacattatcaccagtgatgcatacgtgacagtgacagtccctcag
gtgacactcgcccgcacccgcgtgttgaaaaatgccgcaacccccgtttgggagcaaagg
ttcaatatccctttggcacatcctgttaaagatattgaatttcacgtcaaagataatgat
ttgttcggtgcagagttgatcgggaccgtgaagatacctgcatcaacagtgttgtcgggg
gagtttattcagggatggtttccaataattgctgcatcagggaaaccaccaaagcccgac
acagctctttatctggaattgaaattcacaccttttgagaaaaaccctttataccagaat
gggtttggaggtgatcctgtagtaaatggggtgaggggtacctatttcccggtccgaaaa
ggcggtcatgtgacactctatcaagatgctcatgtgaaggatcatgacttgcctgagatt
gagattgatggagggaaggtttttaagcaagagaggtgctgggaggatatttgttatgcc
atatccgaagctcatcatatgatttatattgttggctggtctgtcttttataagattaag
ttggttagagaaccaactaggccattgccaagaggtggaaatttgacacttggggagctg
ctgaagtataagagcgaggaaggtgtgagagtcttgttgttggtttgggatgataggact
tctcatgataaatttgggattaaaacagcaggagttatggcaacacatgatgaagaaacc
agaagattcttcaagcattcatctgttacttgtgtgttggcacctcgatatgccagcagt
aagctcagttttctcaagcaacagattgttggaaccatgtttacgcaccatcagaaatgt
gttcttgtggacacccaagcatccggtaataacaggaagatcactgcatttataggaggc
attgatctctgcgatggacggtatgatactcccggacatagactgtttcatgatctcaac
actgtctttcaggatgatttccacaatccaacatttcctgctttaaccaaagcaccaagg
cagccctggcatgacctgcattgtaaaattgatgggccagctgcatatgatgctcttata
aactttgagcagcgttggaggaaagcaacaaagtggacagagttgggactgcgtttcaaa
agaaaatcccactggagcgatgattcattgataaagatagaacggatttcgtggatacta
agtcctcacctttctgaaacaaaggatggaaccacaatagttccacctgatgatcccaca
gtatatgtttccagtgaagaaggccctgagaattggcatgtccagatttttaggtccatt
gactccggatcactgaaaggatttcccaaaactattgatgagtgtcaggatcagaaccta
gttgttgcaaaagatctggttgtagataaaagcattcaaacagcatacatacaagccatc
agatctgctcagcatttcatatatattgaaaatcagtattttcttggatcctcatatgca
tggccatcatataaggatgcaggagctgataatctaatcccaatggagttggcattgaag
attgttagtaaaattagagccaaagagagatttgcagtatatgttgttattccattgtgg
ccagagggtgatccaaagaccaacactgtgcaagaaattctcttttggcagagccagaca
atgcaagcaatgtatgaaaaaattgcacaggaacttaaatcaatgaatcttgtagattca
catcctcaagactacctcaatttctattgcattggtaaacgagaagaaattccccaagaa
ttgtcgagtgctaatggtggaacggtctccgaatcttttaaatctcagcgattcatgatt
tatgtccatgcaaagggaatggtagtggacgatgagtatgtgataatgggatctgcaaat
attaaccagagatccatggctgggtcaaaagacactgagatagctatgggttcatatcaa
ccccggcacacatgggctgcaaggaagaagcatccacgtggacagatttatggatataga
atgtcactatgggtggaacatcttggtgagatagatgaactgttcatggaacccgaggat
ttgcattgtgtgaagaaagtaaataaaattgccgaggacaactggaggaaattcacagat
ccgaatttcaaactgttgcaaggacatcttctcaagtatcctttgctggtagatgctgat
gggaaggtgtgtccacttcctggacatgagaatttcccagatgttggtggcaaggtgctt
ggagctcattccaccacacttcccgatgtgttaacaacataa
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