Populus trichocarpa (black cottonwood): 7469221
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Entry
7469221 CDS
T01077
Name
(RefSeq) tubby-like F-box protein 8
KO
K19600
tubby and related proteins
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pop03037
]
7469221
04990 Domain-containing proteins not elsewhere classified [BR:
pop04990
]
7469221
Cilium and associated proteins [BR:
pop03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
7469221
Domain-containing proteins not elsewhere classified [BR:
pop04990
]
Other domain-containing proteins
Tubby family proteins
7469221
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
F-box-like
F-box
DUF3527
Motif
Other DBs
NCBI-GeneID:
7469221
NCBI-ProteinID:
XP_002306697
UniProt:
B9H7S3
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Position
5:19985556..19990392
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AA seq
423 aa
AA seq
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MSFRSIVRDMRDGFGSLSRRSFEVRLPGHHRGKSHSSACELHDQPVVIQNSRWAGLPPEL
LRDVIKRLEASESTWPARKHVVACAAVCSAWREMCKEIVRNPEFSGKITFPVSLKQPGPR
DGTIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISR
SSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGRSRRFYSKKVSPKVPTGSYNIAQV
TYELNVLGTRGPRRMHCTMHSIPASSLEPGGSVPGQAELLPRSLEDSFRSISFSKSIDNS
TEFSSSRFSDIVGPREDEEGKERPLVLRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLI
AATQPAAGAPTPSQPVQSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKL
ACE
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccgtagtatagttcgtgacatgagggatgggtttgggagcttgtcgaggcgg
agttttgaggtcaggctgccaggtcatcacagagggaaatctcatagctcagcttgtgag
ctgcatgaccagccagtggtcatccagaatagtcgttgggctggtcttcctcctgagtta
ttgcgggatgtgatcaagaggttggaggctagtgagagcacatggcctgcccgcaagcat
gttgttgcttgtgctgctgtgtgcagtgcttggagagaaatgtgcaaagaaattgtcaga
aatccagagttctctggcaagatcactttcccagtttccctaaagcagccagggcccaga
gatggaactatccagtgcttcataaagagggacaaatcaaaattaacttaccatcttttc
ctttgccttagccctgctttgcttgttgaaaacgggaaatttcttctgtctgcaaaacgt
acccggagaaccacatgcacggagtatgttatctccatggatgcagataacatatcaaga
tcaagcagcacttatattggaaaactgaggtcaaattttctgggtacgaagttcataatt
tatgacacacagccgccatacaacaatgctcagctttcaccacctggtcgaagccgcagg
ttttactcgaagaaagtttctccaaaggtccctacaggcagctataacattgctcaggtt
acatatgagctgaatgtgcttggcactaggggtccacgaaggatgcactgcaccatgcac
tctatccctgcatcatcccttgagccaggtgggtctgtcccaggccaggctgagctcctc
ccacgctcccttgaagactcgtttaggagcatttccttctcaaaatcaattgacaattca
accgagtttagcagttcccggttctctgacattgttgggcctcgagaagatgaagaggga
aaggagaggccacttgttcttcggaacaaggcaccaagatggcatgagcagttgcagtgc
tggtgcctcaatttccgtgggagagtgacagtagcatctgtcaagaatttccagcttatt
gctgcaacgcaacctgctgctggtgcaccgactccatcacagcctgttcagtctgatcat
gacaagatcattcttcagtttggtaaggttggtaaggatatgttcactatggattaccgg
tatcctttgtctgcgttccaggcttttgcaatctgtttgagcagctttgacactaaattg
gcttgtgaataa
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