Populus trichocarpa (black cottonwood): 7469370
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Entry
7469370 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7469370
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7469370
Enzymes [BR:
pop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
7469370
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
7469370
Ribosome biogenesis [BR:
pop03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
7469370
23S rRNA modification factors
7469370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
Motif
Other DBs
NCBI-GeneID:
7469370
NCBI-ProteinID:
XP_006375601
LinkDB
All DBs
Position
14:complement(13099075..13105463)
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AA seq
319 aa
AA seq
DB search
MAQYLKLPIIFSRSACSSENSSLLLLSRSYHCHHYYASNLPPVRWVKPEMHCSPIRSFAA
APAKAGKFQLPKKKRRLDEICLERFQQYSRTFIQSWILQGKVFVDGKVANKAGTPVSEKS
VVEIIAVVPKYVCRAGYKLEAAIEKLDVDVAGKVALDSGLSTGGFTDCLLQYGASFVYGV
DVGYGQVADKIRRDERVCVIERTNLRYLSELPQKVDLVTLDLSFISILLVMPAVVNVMKE
EATLVTLVKPQFEARRSQVGSGGIVRDSQVHQEVLEKITKGVEGFGFRSNGWIESPLKGA
EGNIEFLVHFSRIHENSAE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtatctcaagcttcccattattttctcacgctccgcctgtagttctgaaaat
tcaagcttgcttctcttatccagatcctaccactgccaccactactacgcttctaatctt
cctccagttagatgggtcaaaccagaaatgcactgcagtccaattagaagctttgctgct
gctcctgctaaggctggaaagtttcaactacctaaaaagaaacggaggctggatgaaata
tgtcttgaaaggttccagcaatacagccgaacatttatacaatcatggattttacaaggt
aaagtatttgtggatggaaaggtggcgaacaaagctggcacacctgtgtctgagaaatct
gttgttgagataattgctgtagttccaaaatatgtatgtagggcaggatataaactagaa
gctgccattgaaaaactggatgttgatgtagctggcaaagtagctctggattcaggattg
tccactggaggatttactgattgcttgcttcagtatggtgcatcatttgtttatggagtt
gatgtaggttatggacaggtggcagacaagatacgtcgagatgaacgtgtttgtgtgata
gaaagaacaaacttaagatacctctctgaactcccccaaaaagttgatttggtgactctg
gacctctcattcatctctattctcctggtcatgcctgctgtagtgaatgtcatgaaggaa
gaggcaacgttagtgaccctggttaaacctcaatttgaagctcgcagatctcaagtagga
agtggcgggatagtaagagattcccaagtccaccaagaggttctagagaagataacaaaa
ggcgtggagggctttggattccgcagcaatggttggattgagtctcctctaaagggtgct
gagggtaacatagaatttcttgtgcacttcagtcgaatacatgaaaatagtgcagaatga
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