Populus trichocarpa (black cottonwood): 7469518
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Entry
7469518 CDS
T01077
Name
(RefSeq) vacuolar protein sorting-associated protein 60.1
KO
K12198
charged multivesicular body protein 5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7469518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7469518
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
7469518
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Ortholog
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GFIT
Motif
Pfam:
Snf7
DUF1319
Strep_SA_rep
Fib_alpha
IFP_35_N
Motif
Other DBs
NCBI-GeneID:
7469518
NCBI-ProteinID:
XP_002316482
UniProt:
B9HVJ9
LinkDB
All DBs
Position
10:21955897..21958975
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AA seq
236 aa
AA seq
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MRRVFGAKKDKEPPPSIQDASEKINKRGDTVDEKIKKLDAELARYKEQIKKTRPGPAQEA
VKARAMRILKQKRMYEGQRDMLYNQTYNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEEELMGELDALEADMGMETE
SDGVPSYLQPDKESDLDAELNLPSAPTGQGAPASRYNAQAEDELGLPAVPRASLRG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaggagagtttttggtgctaaaaaagataaagaaccaccaccttcaatccaagatgca
tcagagaagataaataaaagaggtgatacagtagatgagaagatcaagaagctagatgca
gaacttgctagatacaaagaacagattaaaaagacaagacctggacctgctcaagaggct
gtgaaagctagagctatgaggattcttaaacaaaagagaatgtatgaaggacagcgtgac
atgctctataaccagacgtacaaccttgatcaagttgcatttgcttctgaaggaattaaa
gatgctcaacaaactatgtcagctttgaaatccgccaacaaggaattgaaaggaatgatg
aaaactgtgaagattcaagatattgataacttgcaagatgagatgatggacttgatggat
gtgagcaatgaaattcaagagaccttgggcagaagctataatgtgccagatgatattgat
gaggaagaactcatgggtgaacttgatgctctggaagcagacatgggaatggaaactgaa
tctgatggggtgccttcttatctgcaacctgataaggaatctgatcttgatgcagaactg
aacttgccttcagcgcccacaggacaaggagcaccagctagcagatacaatgcccaggct
gaggatgaactgggcttacctgctgtccctcgggcttctcttcgtggttag
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