Populus trichocarpa (black cottonwood): 7469564
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Entry
7469564 CDS
T01077
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 2 homolog A
KO
K03028
26S proteasome regulatory subunit N1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
7469564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
7469564
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
7469564
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN1_RPN2_N
RPN1_C
PC_rep
HEAT_2
Motif
Other DBs
NCBI-GeneID:
7469564
NCBI-ProteinID:
XP_024461493
LinkDB
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Position
7:14868376..14876836
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AA seq
890 aa
AA seq
DB search
MAPETNKASGSGGATKNDEPVKAPPSKKKEEKKDDDLSEEDLALKQQLELYVERVQDPEP
GVQKLALESLRQEIRSSTSSMTSVPKPLKFLRPHYGTLKAHYEKMSEADLKKYLADILSV
LALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYTKRQSEEASNDDLIEL
VQQIVAFHMKHNAEPEAVDLLMEVEDLNILSKYVDKTNFKRTCLYLTSAAKYLPGPDDLV
VLKIAYEIYIKFTEYASALQIALFLNDLQYIKQVYTSCDDVQQKKQFSYILARHGTAFEL
DDDIASDDIDREVLEEIINNTKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASAGSS
VDSAKQNLAATFVNAFVNAGFGQDKLMTPPTDSSSGGSGNWLFKNKEHGKTSAAASLGMI
LMWDVDSGLAQLDKYFHSNDNHVISGALLGVGIVNCGIRNDCDPALALLDDFVDKEEPSI
RIGAIMGLGIAYAGTQNEQICRKLSLVLNDAKAPLDVIAFAAISLGLVCVGSCNEVVAHA
IILSLMERSKSDLQDPLTRFLPLGLGLLYLGKQESVEATAEVSKTFDEKIRKYCYMTLLS
CAYAGTGNVLKVQNLLGRCAEILEKGETHQGPAVLGIAMIAMAEELGLEMAIRSLEHLLQ
YGQQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLMGAGTNNAR
IAGMLRNLSSYYYKDSSLLFCVRIAQGLVHLGKGLLTLNPYHSDRFLLSPTALAGLITML
HACLDMKAIIFGKYHYVLYFLVLAMQPRMLLTVDENLKPLPVPVRVGQAVDVVGQAGRPK
TITGFQTHSTPVLLAAGDRAELATEKYIPLTAILEGFVILKENPDYREDQ
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggaaacgaacaaggcgagtggcagcggaggtgcaaccaaaaacgatgagccg
gtgaaggcgccgccgtcgaagaagaaagaggagaagaaagacgacgatttatcggaggag
gacttggcattgaagcagcaattggagttgtatgtggaaagagttcaagatcctgaacct
ggagttcaaaagcttgctcttgagagtttgagacaggaaattcgaagctcaacgagttca
atgacttcagttccaaagccattgaagtttcttcgaccacattatggaaccttaaaagca
cattatgaaaaaatgtctgaagccgatctgaagaaatacttggcagatatactctcagtt
ttggcgctgaccatgtctgcagagggagaacgggaaagcttaaaatacagattgttgggt
tcagagggtgatattggttcatggggccatgagtatgtaaggaatttggctggagaaatt
gctcaagagtacacaaagcgacagagtgaagaggcctcaaatgatgatctgattgagctt
gtacaacagattgttgcatttcacatgaagcacaatgctgaacctgaagccgtggacctt
ttaatggaggttgaagaccttaatattttaagtaagtatgtggacaaaacaaatttcaag
aggacttgtctctacctcaccagtgcagcaaaataccttcctggaccagatgatttggta
gttctgaaaatagcatatgagatatatataaaatttacggagtatgcaagcgcacttcag
attgcattattcctcaatgacttgcagtatatcaagcaggtctatacttcttgtgatgat
gtgcagcaaaagaaacaattttcttacatccttgctcgacatggtactgcttttgaactt
gatgatgatattgcttcagatgatatagacagagaagtattggaggaaataatcaacaac
accaaattaagtgagggttaccttacccttgctcgtgatattgaggtcatggagcccaaa
tctcctgaagatatctataaggcacacttgcttgatggccgggctagtgctggttctagt
gttgattcagccaaacagaatttggctgctacatttgttaacgcatttgtaaatgcaggt
tttggacaggataagttaatgacacctccaacagactcttcaagtggtggttcaggaaat
tggcttttcaagaataaagaacatgggaagaccagtgctgcagcaagcctgggtatgatt
ttaatgtgggatgttgactctgggctcgctcagcttgataagtatttccacagcaatgac
aaccatgtgatttctggtgccctactaggggttggaattgtcaattgtggtatcagaaac
gactgtgatcctgccttggcacttcttgatgattttgttgataaagaagaaccatctatc
cgaattggtgcaataatggggctaggaattgcatatgctggtactcagaatgagcagata
tgcaggaaattgtccctggtacttaatgatgcaaaagctccacttgatgtaatagcattt
gctgcgatctcattgggcttggtttgtgtgggttcctgcaatgaagtggttgcacatgct
attatattgtcgttgatggagaggagcaagtcagacttgcaggacccccttactcgattt
ttgccacttggccttggtcttctatatcttgggaagcaggaaagtgtggaggccacagca
gaagtgtccaagacatttgatgagaaaataagaaagtattgttatatgacactgctttcc
tgtgcctatgcaggcactgggaatgttcttaaggttcaaaaccttcttggtcgttgtgct
gaaatccttgagaaaggcgaaactcaccagggaccagctgttcttgggattgctatgata
gcaatggctgaggagttgggccttgaaatggcaattcgctcattggaacatctgttacaa
tatggacagcagaatatccgtagagcagttcctttggcccttggactcctctgtatatca
aaccctaaggttaatgttatggacacattaagtagacttagccacgatacagattcagaa
gttgcaatggctgcggttatttccttaggtttgatgggtgctggaactaacaatgctcgc
atagctggaatgcttcgcaatctttccagctattattacaaagattccagccttcttttc
tgtgtgcgaattgcccaaggtctggtacacttggggaagggcttattgaccctcaatcca
tatcattctgatcgcttcttactatcaccgactgcacttgctggtctaataacaatgctt
catgcctgtcttgatatgaaagcgatcatttttgggaaatatcactatgtcctctacttc
cttgttctagcaatgcagccaagaatgttgttgacagtggatgagaatctgaagccttta
cctgtacctgttcgagtgggacaggcagttgatgttgttggtcaagcaggaagacccaag
accattactggtttccagacccactcaaccccagttcttctagctgctggtgatcgggct
gaactggctaccgagaagtatattcctcttacagccattcttgaagggtttgtcatattg
aaggagaacccagattacagagaagatcagtag
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