Populus trichocarpa (black cottonwood): 7469583
Help
Entry
7469583 CDS
T01077
Name
(RefSeq) asparagine--tRNA ligase, chloroplastic/mitochondrial
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
7469583
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pop01007
]
7469583
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7469583
Enzymes [BR:
pop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
7469583
Amino acid related enzymes [BR:
pop01007
]
Aminoacyl-tRNA synthetase
Class II (A)
7469583
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
7469583
Prokaryotic type
7469583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
7469583
NCBI-ProteinID:
XP_002309798
LinkDB
All DBs
Position
7:complement(14418012..14425172)
Genome browser
AA seq
578 aa
AA seq
DB search
MAIAALGPATSLRLNPGSTLRLLSFYPKSNPSNLPEILKTMTKPHAIPPKFHHFFQLSGL
PRRRFFCSVISGALQSNESAKVGFLEKEKSEVGNRVGEFRKKLKIADIKGGPDEGLDRVG
KTIVVMGWVRTLRVQSSVTFIEVNDGSCLSNMQCVMGLEAEGYDQVESGLITTGASILVQ
GTVVESQGSKQKVELKVNKIVLVGKSDPSYPIQKKRVSREFLRTKAHLRPRTNTFGAVAR
VRNALAYATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTTLIPGSQEVANSPVDRIPK
TKDGLIDWSQDFFGKPAFLTVSGQLNAETYATALSDVYTFGPTFRAENSNTSRHLAEFWM
IEPELAFADLTDDMACATAYLQYVVRHILENCKEDMEFFNTWIEKGIIDRLTDVAEKDFV
QLTYTDAVELLLKAKKKFEFPVEWGCDLQSEHERYITEEAFGGCPVIIRDYPKDIKAFYM
RQNDDGKTVAAMDMLVPRVGELIGGSQREERLEYLEDRLDELKLNKESFWWYLDLRRYGS
VPHAGFGLGFERLVQFATGLENIRDAIPFPRVPGSAEF
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggctattgctgctttaggaccagctacttcgctccggttaaacccggggtctactctt
cggttgctgtctttctaccccaagtcaaaccctagtaacctccctgaaatcctcaaaaca
atgacgaaacctcatgccatacctccaaagttccaccatttttttcaactttcaggtttg
cctcgccggaggttcttctgcagtgtgatttctggagctctacagtctaacgagagtgca
aaagtgggatttttggagaaggagaagagtgaagtgggaaatagagttggagaatttaga
aaaaagttgaagattgctgatataaagggtggtccagatgaagggttggatcgtgtaggg
aagaccattgttgtgatgggttgggttcgtactcttcgtgttcagagcagtgttacgttt
attgaggttaatgatggttcatgcctatcaaacatgcaatgtgtaatgggattggaggct
gaaggttatgatcaggtagaatctgggttgataacaactggcgcatcaatattggtgcaa
ggaactgtggtggagagccaaggatcaaaacagaaggtggaactgaaggtcaacaaaatt
gttttggttggcaagagtgatccttcctatcccattcaaaagaaaagggtcagcagagaa
tttttgagaactaaagctcaccttcgtcctagaacaaatacatttggtgcggttgcaagg
gtgaggaatgctttagcatatgccactcacaagtttttccaagaaaatgggtttgtttgg
gtctcaagtcctattattacagcttcagattgtgaaggggccggtgagcagttctgtgtg
actactttgattccaggctctcaagaagttgctaattctccggtggataggattccaaaa
acaaaggatggcttaattgattggtcacaagacttttttggcaaaccagcttttctgacg
gtctctggccagctcaatgctgaaacatatgccactgctctttcggatgtgtatacattt
ggtcccacatttcgagctgaaaattctaatacttcaaggcatttggctgaattttggatg
attgaaccagaacttgcatttgctgatctgactgacgacatggcctgtgccactgcctat
ctccagtatgtagtgagacatatccttgaaaactgcaaggaagacatggaatttttcaat
acttggattgagaagggaatcattgatcgattgactgatgtggctgagaaagactttgtt
cagttgacttatactgatgcagttgaacttcttctgaaagcaaaaaagaagtttgaattc
ccggtggaatggggatgtgatttgcaaagtgagcatgagcgttatataactgaagaggca
tttggtgggtgccccgtcataatcagagattatccaaaggacatcaaagcattttatatg
cggcaaaatgatgatgggaaaactgtcgctgctatggacatgctggttcctcgggttggt
gaacttattggtggaagccaaagagaggaacggcttgaatatctagaagaccgtttagat
gagttaaagttgaacaaggagagcttctggtggtatcttgatttgcgacgttatggttca
gttcctcacgcgggtttcggacttggttttgagaggcttgtgcaatttgctactggatta
gaaaatataagagatgcaattcctttccctcgggtacctggttctgcggaattttaa
DBGET
integrated database retrieval system
