Populus trichocarpa (black cottonwood): 7469610
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Entry
7469610 CDS
T01077
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7469610
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Motif
Pfam:
GH3
GH3_C
GH3_M
AIG2_2
Motif
Other DBs
NCBI-GeneID:
7469610
NCBI-ProteinID:
XP_024464929
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Position
9:8462418..8464888
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AA seq
596 aa
AA seq
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MAVDNALSSPLGPPACEKDAKALQFLEEMTRNADSVQEDVLAKILTQNSEVEYLKRFNLD
GAIDRETFKSKIPMIRYEDLQPEIQRIANGDRSSILSAHPISEFLTSSGTSAGERKLMPT
IKQELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSD
HFKTRPYDPYNVYTSPNEAILCADSFQSMYTQMLCGLLEREQVLRVGAVFASGLLRAIRF
LQLHWRELSDDIESGMLNKKITDPTVKDCMVNILKPNPKLAEFVRMECGKENWEGIITRI
WPNTKYLDVIVTGAMAQYIPTLDYYSGGLPKACTMYASSECYFGLNLNPMCKPSEVCYTI
MPNMAYFEFLPHEPAGISQDSTPKLVDLADVELGKEYELVITTYAGLYRYRVGDILRVTG
FHNSAPQFHFVRRKNVLLSIDSDKTDEAELQTAVENASQLLREFNTSVVEYTSHADTKTI
PGHYVIYWELLVKDSANSPGDEVLNQCCLAMEESLNSVYRQGRVADNSIGPLEIRVVKNG
TFEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVVSKHFSPALPRWAPERRR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgataatgctctttcatcacctcttggtcctccagcgtgtgagaaagatgct
aaagctcttcaattcctcgaggaaatgactagaaatgctgactccgttcaagaggatgtt
ttggctaaaatcttgacccaaaactccgaggttgagtacttaaaacggttcaatcttgat
ggtgcaattgaccgtgagacttttaagtctaaaatccccatgattagatacgaggatctt
cagcctgaaattcaacgaattgctaatggagatcgctcttccatcttatcagctcacccc
atctcagaattcctcactagttccgggacatctgctggtgaaagaaagctcatgccaaca
attaaacaagagctggatcgtcgccaattattgtatagtttactcatgccagtaatgaac
ctttacgtgcctgggttagacaaaggcaaaggcttatacttcttgtttgtgaaatctgaa
acaagaaccccaggaggtctcttggctcgtccggtgcttacaagctattacaagagtgac
cacttcaagacacgtccatatgatccttacaacgtgtacacaagcccgaatgaggccatt
ctttgtgcagattcattccagagcatgtacactcagatgctctgtggccttctagagcgc
gaacaagtgctcagggtcggtgcagtctttgcctccggcctcctccgtgctataaggttt
ctccagcttcactggcgtgaactttctgatgatatcgagtcaggaatgctaaacaagaaa
atcactgacccgacggtcaaagattgcatggtgaatattctgaaaccgaacccaaagctc
gcagagtttgtcaggatggagtgtggtaaggaaaattgggaagggatcattacaagaatt
tggcctaacaccaaatatcttgacgtgatcgtcactggagccatggcccaatatatccct
acccttgactactacagtggtggcttacctaaagcatgcaccatgtatgcctcatcagaa
tgttactttgggttgaacctcaacccaatgtgcaagccatcagaagtttgctacacaatc
atgccgaatatggcctactttgagtttttaccccatgagcctgctgggatcagtcaggat
tcaactccaaaacttgttgatcttgctgatgttgaattgggtaaagaatacgagcttgtt
atcacaacctacgccggtttatacaggtatcgagttggtgacatccttcgagttactggg
ttccacaactcagctcctcaattccatttcgtacgaagaaagaatgtattgctcagtatt
gactcagacaaaacagatgaggccgagttacaaacggccgtcgagaatgcatcgcaactt
ctacgtgaattcaacacaagtgtagttgaatacacaagccatgccgatacaaagacgatt
ccagggcactatgtgatttactgggaattattggtcaaagactcagcaaactctcctggt
gacgaggtactgaaccaatgttgccttgccatggaagaatctttgaactcggtgtatcga
caaggtcgagtcgcagataattcaattggaccactagagatacgtgtggttaaaaatggt
acatttgaggagctgatggattatgcgatttcaaggggggcatccattaatcagtataag
gtaccaaggtgcgttaattttactccgatcatggagttgcttgattctagggtggtatcc
aagcattttagcccagctttgccacgttgggccccggaaagaagaaggtga
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