Populus trichocarpa (black cottonwood): 7469640
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Entry
7469640 CDS
T01077
Name
(RefSeq) telomere repeat-binding factor 1 isoform X4
KO
K09422
transcription factor MYB, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7469640
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
7469640
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Gene cluster
GFIT
Motif
Pfam:
Linker_histone
Myb_DNA-binding
HTH_CHD1_Hrp3
Myb_DNA-bind_6
CHDCT2
Motif
Other DBs
NCBI-GeneID:
7469640
NCBI-ProteinID:
XP_002313916
UniProt:
A0A2K1Z526
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Position
9:8114153..8118560
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AA seq
315 aa
AA seq
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MSLEEPDLFVWGVYLLISLMGAPKQKWTAEEEAALKAGVIKHGAGKWRTILKDPEFSGVL
YLRSNVDLKDKWRNMSVMVNGYGSREKPKLAPKRVHHVHRQDENLMSVGTVQSDEDIPDA
KALPVSSAALPVVNPKRTTVRLDNLIMEAITSLKEPGGSHKTAIASYIEEQYWPPNDFKR
ILSAKLKYLAANGKLIKVKRKYRIAPTSAFAERRVSPLFFEGRQRISPKIERDDFNILTM
SQIDLDLGKMRTMTAEQAAEVAARAVAEAEAAIAVAEEAAREAETAEADAEAAQAFAEAA
MKTLKGRTAPKTVRA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagcctagaagaacctgatttgtttgtttggggagtttatttattgataagcttgatg
ggtgcacccaaacagaaatggacggcagaagaagaagcagcgctaaaagctggagtgatt
aagcatggagctggaaaatggcgcacgatacttaaagatccggaatttagtggtgtcttg
tatctgcgttcgaatgtggaccttaaggacaaatggagaaacatgagtgtaatggtaaat
gggtatggctcgagagagaagcctaagttagcacctaaaagggtgcaccatgtccataga
caggatgagaaccttatgtctgttggcactgttcaaagcgatgaagatattccagatgcc
aaggctcttccagttagcagtgctgcattgccggttgttaatccgaagagaactactgta
aggctggataatcttataatggaggcaataactagcttgaaggagcctggaggttcacat
aagaccgcaattgcttcatacatagaggaacaatattggccaccaaatgactttaagagg
atattatcagctaaattgaagtatctggcagcaaatggtaaactgattaaggttaaacgg
aagtatagaattgcacctacttcagcatttgctgagagaagggtttctcccttattcttt
gaaggaagacagaggatctctcccaaaattgaaagggatgatttcaatatacttacaatg
tctcagattgatttggatctggggaagatgaggactatgaccgcagaacaggctgctgag
gtagcggctcgagcggttgcggaggcagaagctgctatagcagtagctgaagaggcggca
agggaggcggagacagcagaagctgatgcagaggcagcacaagcatttgcggaagcagct
atgaagacactgaaaggaaggaccgcccctaagacggttcgagcttga
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