Populus trichocarpa (black cottonwood): 7469656
Help
Entry
7469656 CDS
T01077
Name
(RefSeq) aspartate--tRNA ligase, chloroplastic/mitochondrial
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
7469656
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pop01007
]
7469656
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7469656
03029 Mitochondrial biogenesis [BR:
pop03029
]
7469656
Enzymes [BR:
pop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
7469656
Amino acid related enzymes [BR:
pop01007
]
Aminoacyl-tRNA synthetase
Class II (A)
7469656
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
7469656
Prokaryotic type
Other AARSs
7469656
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
7469656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
ATP-synt_DE_N
Motif
Other DBs
NCBI-GeneID:
7469656
NCBI-ProteinID:
XP_024463857
LinkDB
All DBs
Position
9:complement(7911055..7917779)
Genome browser
AA seq
664 aa
AA seq
DB search
MTLLLRSFPLITLRTTIPSSLPLFQNLLRYHFPKSLQAKRTRALVTLSASSSSPETILKP
QQQQPNDTLHWVSRTNFCGQLSTNDVGTRVRLCGWVALHRVHGGLTFLNLRDHTGIVQVA
TSPDEFPDAHSIINDLRVEYVVVVEGFVRSRPVESVNKKLITGSIEVVAEHVQLLNAVKA
KLPFLVTTADDAKDSVKEEIRLRYRCLDLRRQQMSSNIMLRHRVVKLIRRYLEDVQGFVE
IETPILSRSTPEGARDYLVPSRIQPGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDE
DLRADRQPEFTQLDMELAFTTLEDMLRLNEDLIRKVFLEIKGVQLPNPIPRLTYAEAMSK
YGSDRPDTRFDLHLKEVSDIFAESSFRVFADSLNSGGIIKVLCVPSGAKSYSNSALKKGD
IYNEAIKSGAKGLPFLKVLDDGELEGISALVSSLDSTNKEQLLSRCSAGPGDLILFAVGH
HPSVHRTLDRLRLFIANQLGLIDHSRHSILWVTDFPMFEWNETEQRLEALHHPFTAPNPE
DMEDLSSARALAYDMVYNGVEIGGGSLRIYKREVQQKVLEIVGISPEQAEAKFGYLLEAL
DMGAPPHGGIAYGLDRLAMLLAGATSIRDVIAFPKTTTAQCALTRTPSEVDPQQLRDLSF
SIQQ
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgactcttctcctccgatccttccctctaatcactctccgcaccaccataccctcctct
cttcctctcttccaaaatcttctcaggtatcacttccctaagtcgcttcaagcaaaacgc
acaagagccctcgtcactctttctgcttcttcttcttcccctgaaaccattctcaagcca
cagcaacaacaacctaacgatacccttcactgggtctctcgtaccaacttttgtggtcaa
ttatcgaccaatgatgttggcacacgtgttcgtctctgtggctgggttgctcttcataga
gtccatggtggtctcacctttctcaatcttagagaccacactggcattgttcaggttgcg
acttcgcctgatgaatttcctgatgcgcattcgattataaatgatttgagagtggagtat
gtggttgttgttgaagggtttgttcggtctcggcctgttgagtctgtcaataagaaactg
ataactggttctattgaggttgttgcggaacatgttcaattgttaaatgcagtgaaagca
aagttgccttttttagttactacagcagatgatgctaaggattctgttaaggaggagatt
cgtttgagatatcgatgtcttgacttacggcgacagcaaatgagttctaacattatgttg
aggcatagagtggtgaaactcattagaagatatctagaggatgtgcagggttttgtggag
attgagacccccatactttctagatctactccagaaggtgcccgggattatttggtgccc
tcaagaattcagccaggaaccttctatgctttaccccagagtccacaactctttaagcaa
atgttaatggtatccggttttgacaaatattatcaaattgcaagatgctttagagatgaa
gatctaagggcagatcgacaacctgagttcactcagctagatatggaattggcgttcact
accttggaggatatgctgaggctcaatgaagatcttatccggaaggtttttttggagatt
aaaggtgtccagctaccaaatccaatccctaggcttacatatgctgaagcaatgagtaaa
tatggttcagacaggccagacacaagatttgatcttcatttgaaagaagtatctgatatt
tttgcagagtcctctttcagggtttttgcggatagcttgaacagtgggggtattattaaa
gtactatgtgttccttcaggtgctaaaagttattcaaactctgctcttaagaaaggtgat
atttacaatgaagcaatcaaatctggagcaaagggtttgccctttctaaaggtcttggat
gatggggagcttgagggaatttctgcactagtgtcaagtttggactcaacaaataaagag
cagttgctaagtcgctgctctgcaggaccaggggatcttatcttgtttgcagttggtcat
catccatcagttcatagaacgctcgatcgacttaggctattcatagccaatcagctgggc
ttgattgatcattccaggcattcgattttgtgggtgactgatttcccaatgtttgagtgg
aatgaaacagagcagaggcttgaggccttgcatcatccatttactgctcccaatcctgaa
gacatggaagacctttcctctgctcgtgcccttgcttatgacatggtttacaatggggtt
gagattggtggcggaagtttgagaatttataaacgtgaggtccaacagaaggttttggaa
attgttggcatctcccctgaacaggctgaagcgaagtttgggtatcttctggaggcttta
gacatgggcgctcctccacatggggggattgcttatgggctggacagattggctatgttg
ttggctggggctacttccatcagggatgtcatagctttcccaaagacaacaactgctcag
tgtgcccttactaggacaccatcagaggtggatcctcaacagctcagagatttatctttc
agtatccagcagtga
DBGET
integrated database retrieval system
