Populus trichocarpa (black cottonwood): 7469825
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Entry
7469825 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: heat shock cognate 70 kDa protein 2
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03040
Spliceosome
pop04141
Protein processing in endoplasmic reticulum
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7469825
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
7469825
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7469825
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7469825
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7469825
03009 Ribosome biogenesis [BR:
pop03009
]
7469825
03110 Chaperones and folding catalysts [BR:
pop03110
]
7469825
04131 Membrane trafficking [BR:
pop04131
]
7469825
03051 Proteasome [BR:
pop03051
]
7469825
03029 Mitochondrial biogenesis [BR:
pop03029
]
7469825
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7469825
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
7469825
Spliceosome [BR:
pop03041
]
Complex B
Other components
Prp19 complex
7469825
Complex C
Prp19-CDC5 complex
7469825
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
7469825
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP70 / DNAK
7469825
Membrane trafficking [BR:
pop04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
7469825
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
7469825
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
7469825
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
7469825
Exosome [BR:
pop04147
]
Exosomal proteins
Proteins found in most exosomes
7469825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
DUF7674
Hydantoinase_A
CENP-F_N
Motif
Other DBs
NCBI-GeneID:
7469825
NCBI-ProteinID:
XP_002312092
UniProt:
B9HMH0
LinkDB
All DBs
Position
8:complement(3216797..3222756)
Genome browser
AA seq
1250 aa
AA seq
DB search
METYDSTAIGIDLGTTYSCVGVWQNGRVEIIPNDQGNRMTPSCVAFTDTERLIGEAAKNQ
VVSNPVNTIFGAKRLIGMRFSDVAVQSDIQHWPFKVVAGPRDKPMIVVNYKSEERQFAAE
EISAMVLRKMGEIAEAFIGKSVKNAVITVPAYFIDSQRQATKDAGLIAGFNVMRIINEPT
AAAMAYGLDMDINYGEKNVLVFDLGGGTCDVSLLVIEERIVEVRATAGDSHLGGEDFDNR
LVNYFVQEFKRRKKKDISGDPSALRRLRTACERAKRSLSHDVQTNIELDSLCEGIDFCST
ITRARFEELNTDLFRKCLQLVNKCLRDGKMDKNSIDDVVLVGGSSRIPKVQLLLQYFFNG
KELCTSINPDEAVAYGAAVQATILSGGGHEELERMILLDVSPLSLGLEIAGGVMDAVVKR
NTTVPTKKEGLFSTYADNQTAVLIKIYEGERTRTRDNNLLGTFELSGIAPAPKGVPQIKI
IFDIDADGILIVSAEDETSGQKKRITITNDRGRWSEKEIQKMVHEAERYKSEDEKHKKWA
EAKNGLEIFVRNMRITIGDEKRSSKLATGDKNKIEGAIDQAMKWLDGNQLARKDDFDGKL
GELESICNPIIAKIYRSDGACMGTLMEDEVSPSDGYGTYGDEKPREDIVENVPNDQGNRM
TPSCAAFTGIERLIGDAAMNQAVMNPINTIFDIYMLKDAKRWVGRRFSDTFVQSNIQHWP
FKVLEVPRDKPLIVVNYNGEEKXFAAEEISSRVLLKMHQIAEAYHGTAMKLAVLIAPAYF
NVPQRQATADAGKSAGLXVMHIINEPTAAAMAYGLEKRAIIVVERNXFDLGGGTFDVTLL
TIEGNIFXLKATAGDSHLGGEDFDNRMMKHFVQEFRKRNKEKDSSGSAMALRRLSTACER
MKRSLSSSTQANIEMDSLYDGIYFYSIITRALFEELKVDLSGKCLKLVEKXLRDAKMDKS
SIDDIVLIGGSNRIPMVQHLLQYFFIGKELYKNINPGEAVAYGAAVLNGEEEDNEKMQDL
LLLDAIPXSLGLETAGGIVTVLIPRNTTFPTNKEEVFSTYSDGQPGVLIKVNEGERTRTW
GNNLPGIFXLSGFPPAPRGVPWIKVXFDIDANGILIVSGEDVISGXKKEIEKMTQKVEKY
KAEDEKHKNMVEAKNVLDNAYNIRNCVGYNNISLKLVEEDKNIEDALDQVSDGLNWNELV
KTNELEDMLKELQSVINTIIAKIDQGAGRLHDEVPLFVGSETAPAIGEIN
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggaaacatacgattctacagcgattgggattgatttggggacaacgtattcttgcgtt
ggggtttggcaaaatggaagagttgagattataccaaatgatcaaggcaacagaatgacg
ccttcttgcgttgccttcactgacacggagcgtttgattggtgaagctgcaaagaaccag
gttgtttccaaccctgtcaacaccatcttcggtgcaaaaaggttaattggtatgagattc
agtgatgttgctgttcagagtgatatccagcactggccgttcaaggttgttgcgggtcct
cgtgacaagcccatgattgtggttaattacaagagtgaagagaggcaatttgctgctgaa
gagatttcggcaatggtactccgaaagatgggtgagattgctgaagctttcatcggcaaa
agtgtgaagaatgcagtgattactgttcctgcctactttattgactctcaacggcaggcc
acaaaagatgctggtttgattgctggttttaatgtcatgcgtattattaacgagcccact
gctgctgccatggcttatggtcttgacatggatataaactatggtgagaagaatgtgctg
gtctttgatttagggggcggtacttgtgatgtctcgttgcttgtcattgaagagcgtata
gttgaagtgcgggccacagctggagactctcaccttggaggcgaggactttgacaacaga
ttggtgaattactttgttcaggaattcaaaaggaggaaaaagaaggacattagtggagat
ccttcagctcttaggaggttgcgaactgcttgtgagagggccaagaggagtctctcacat
gatgttcaaactaacattgagctcgattcattgtgtgaaggtattgacttttgttccacc
attactcgtgcaagattcgaggagctgaacacggatctctttagaaagtgtttgcagctg
gtgaacaagtgtttgagggatggtaagatggataaaaacagcatcgatgatgttgttctt
gttggtggttccagccggattcccaaggtgcagctgctattgcaatactttttcaatggc
aaagagctctgcacgagcatcaatcctgatgaggcagttgcctatggtgctgctgttcag
gctactatcttgagtggcggaggccatgaggagttggaaagaatgatacttctggatgtt
tctcccctgtcccttgggttggaaattgctggcggtgttatggatgctgtggtaaaaagg
aacactacggttcccacaaaaaaggagggtcttttctccacctacgcagacaatcaaact
gctgtcttgatcaagatttatgagggagagagaacaaggactagggacaacaacttactg
ggaacatttgagctctctggtattgctccagcacccaaaggtgttcctcagatcaaaata
atctttgacattgatgcagatggtatcttgattgtatcagctgaggatgagaccagtggt
cagaagaaaaggatcacaatcaccaatgacaggggcaggtggtccgaaaaagaaattcag
aagatggtccacgaggccgaaaggtacaagtctgaagatgaaaagcacaagaagtgggcc
gaggcaaagaatggattggagatttttgtccgcaacatgagaataacaattggggatgag
aagagaagttcaaagctggccacaggtgacaagaacaagattgaaggtgccattgaccag
gccatgaagtggctggatggcaaccaacttgcaaggaaagatgatttcgatggcaagttg
ggggagcttgagagcatctgcaatccaatcattgcgaagatttataggagcgatggtgct
tgtatgggtacgttaatggaagatgaagtttctccatctgatggttatggcacatacgga
gatgaaaaaccacgggaggacatagtggagaacgtaccaaatgatcaaggtaacagaatg
accccatcttgtgctgccttcactggtatagagcgtctgattggtgatgctgctatgaac
caggctgttatgaatcccatcaacactattttcgacatctatatgttaaaagatgcgaaa
aggtgggttggtaggagatttagtgatacttttgtgcagagcaatatccaacattggcca
ttcaaagtccttgaagttcctcgtgacaagcccttgattgtggtcaactacaacggtgaa
gagaaatagtttgcagctgaagaaatatcttcaagggtcctcttaaagatgcatcaaatt
gcagaggcttaccatggcactgcgatgaagcttgcggtactcattgcccctgcctacttc
aatgtccctcaacgacaggccacagctgatgcaggcaagagtgctggtctcnatgtcatg
catatcattaatgagcccactgctgctgcgatggcttatggtcttgaaaagagggcaatt
attgttgttgagaggaatnngtttgacttgggtggtggtacttttgatgtcaccctgctt
actattgaagggaatatcttttagctgaaggccactgctggagactcccaccttggaggt
gaggactttgataacagaatgatgaagcactttgttcaggaatttaggaagaggaataag
gagaaggatagcagtggaagtgccatggccctcaggaggttgagtactgcttgtgagagg
atgaagaggagcctctcatcctctactcaagctaacattgagatggattctctatacgac
ggtatctatttttattccatcattactcgtgcattatttgaggagctaaaggtagatctc
tctggaaagtgtttgaagctggtggagaagtgattgagggatgccaagatggacaaaagc
agcatcgatgatattgttcttattggtggttccaataggattcctatggtgcaacattta
ttgcaatattttttcattgggaaggagctctacaagaacatcaatccaggtgaggctgtt
gcctacggtgctgctgtcttgaatggtgaagaagaagataatgagaaaatgcaagatctg
ctgcttctggatgcaattcctnngtccttggggttggaaactgctggtggtattgtgact
gttttgatccccagaaacaccacctttcccacaaataaggaagaagttttctccacctac
tcggatggtcagcctggtgtcttgatcaaggttaatgaaggagagagaacaagaacttgg
ggcaacaacttgcctggcatttttnagctctcgggatttcctccagcacccaggggtgtt
ccttggatcaaggtanactttgatattgatgcaaatggcatcttgattgtgtcaggtgag
gatgtaatcagtggtnccaaaaaagagattgagaagatgactcagaaggttgagaagtac
aaggctgaagatgaaaagcacaagaacatggtagaggcgaaaaatgtgttggataatgcc
tacaacatcagaaactgcgttggatataataatatcagtttgaaactggttgaagaagac
aagaacattgaagatgctcttgatcaggtgagcgatgggctgaattggaacgagcttgtc
aagacaaatgagttggaggacatgttgaaggagcttcagagtgtcatcaatactatcatt
gccaagattgatcagggtgctggcaggttgcacgatgaagttcctctgtttgttggcagc
gagacagctccagccattggagaaattaactag
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