Populus trichocarpa (black cottonwood): 7469889
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Entry
7469889 CDS
T01077
Name
(RefSeq) syntaxin-132
KO
K08486
syntaxin 1B/2/3
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
7469889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7469889
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7469889
Membrane trafficking [BR:
pop04131
]
SNARE
Syntaxin (Qa)
Stx-PM
7469889
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
7469889
Exosomal proteins of other body fluids (saliva and urine)
7469889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
T2SSF
SteA-like_C
Stonustoxin_helical
DUF6688
NOG1_N
DUF2383
MG280
Fusion_gly
CCDC-167
IFT46_B_C
FapA
Motif
Other DBs
NCBI-GeneID:
7469889
NCBI-ProteinID:
XP_002325846
UniProt:
B9IPR8
LinkDB
All DBs
Position
19:complement(5009184..5016287)
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AA seq
304 aa
AA seq
DB search
MNDLLSESFEIPRGQGSRGGDIEMGMNSADLGLESFFKKVQEIEKQNEKLDKLLKKLQDA
HEESKAVTKAPAMKGIKQRMEKDVDEVGKIARSIKSKLEELDKENLSNRQKPGCGKGTGV
DRSRTSTTIALKKKLKDKMAEFQTLRENIHQEYREVVERRVFTVTGTRADEETIDTLIET
GDSEQIFQKAIQEQGRGQITDTLAEIQERHDAVRDLERKLLDLQQIFLDMAVLVDAQGDM
LDNIESQVSNAVDHVQSGNVALQKAKKLQRNSRKWMCIAIIILLIIVAIIVVTVLKPWNN
NKGA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccttttgtcggagtcctttgagatccctcggggtcagggttccagaggcggg
gatattgagatgggaatgaattctgcagacttgggcttggagagtttctttaaaaaggtt
caagagattgagaaacagaatgagaagctggacaagttgctcaaaaagctccaggatgca
catgaggagtcaaaggctgtgaccaaggctcctgccatgaaaggaatcaaacagcgaatg
gagaaagatgtcgatgaagttggaaaaattgctcgttcaataaagtcaaaacttgaggaa
cttgacaaagagaatttatctaataggcagaagccgggatgtggtaaaggaacaggtgta
gaccgatcaagaacctcaactactatagccttgaaaaagaaattgaaagacaagatggct
gaatttcagactcttagggaaaacatccatcaagagtaccgggaggttgttgagaggcgt
gtttttacagtgacgggaacaagagcagatgaagagacgattgacacattgattgagact
ggagacagtgaacaaatttttcagaaagcaattcaggaacaagggcgaggccagataaca
gatactttggcagaaattcaagagcgccatgatgcagtcagagatctggagaggaaactt
ctggacttacaacagatttttctggatatggctgtcttggtggatgcacaaggggacatg
cttgacaacatagaatcacaggtctcaaatgcagtagatcatgtgcagtcagggaatgtt
gctctccaaaaggcaaagaagttacaaaggaactccaggaaatggatgtgcattgccatt
ataatccttcttatcattgttgccatcatcgttgtgaccgtgcttaagccatggaataac
aacaagggcgcctag
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