Populus trichocarpa (black cottonwood): 7469937
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Entry
7469937 CDS
T01077
Name
(RefSeq) nuclear transcription factor Y subunit A-10
KO
K08064
nuclear transcription factor Y, alpha
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7469937
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
7469937
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
7469937
NCBI-ProteinID:
XP_002322774
UniProt:
B9IIJ3
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All DBs
Position
16:4839745..4844344
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AA seq
321 aa
AA seq
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MTMKIKEHEGIVHNPSGQLSTVPWWSAFGSQTVTGESCGLLKALPVEQFAIGGEAATKQA
RMSTDQRLDKGNITQFTIFPGDCKTSGYGQKNLQAAISLQTALPEYRAHFDLGFGQPVIC
TKYPLVDQCYGVFSTFGPQISGRIMLPMSMTADDGPIYVNAKQYHGIMRRRKSRAKAVLE
NKSTNSRKPYMHYSRHLHAMRRPRGCGGRFLNTKELNEGKGTMEAKKAGDFQPSQATGSQ
NSEVLESGGATLNSSMEANGGGSIFSGSEVTSMYNRGELDLLQINRLGPTFHSFSGMMDR
GHGIVMPSKWVAAADNCCNLK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgaaaatcaaagaacatgaaggaattgtccataatccaagtgggcagttgtca
acagtgccatggtggtctgcatttgggtctcaaactgttactggtgaatcgtgtggccta
ttgaaggctttacctgtagaacagtttgccattggaggtgaagctgcgactaagcaggcc
aggatgagcactgaccaaaggctagataaagggaatattactcaattcactatatttcca
ggtgactgcaaaacttctggttatggacagaaaaatcttcaggcagccatttcattgcaa
acagctctgccagagtatcgtgctcattttgacctaggatttggtcagcctgtgatttgc
acaaagtatcctcttgtggatcaatgttacggagtattctcaacttttggacctcaaatt
tcgggccgaattatgctgccaatgagcatgaccgcagatgatggacctatatatgtaaat
gctaagcagtatcatggaattatgaggcgtaggaagtcccgtgcaaaagctgtgctggag
aataaatcgaccaacagtcgtaagccctatatgcactattcacgccatctccatgcaatg
cgccgaccaaggggatgtggtggccgtttcttgaatacaaaagagttgaatgaaggaaaa
gggacaatggaggcaaagaaagctggtgattttcaaccttctcaggcaactggttctcag
aattctgaagtcttggaatcaggtggagcaactttgaactcctcaatggaagcaaatggt
ggtggatcgattttctcaggatcagaagtgactagcatgtacaataggggagaacttgac
ctccttcagatcaatcgtcttgggccaactttccatagtttctcaggcatgatggacaga
ggacatggcattgttatgcccagtaagtgggttgcagcagctgacaactgctgcaactta
aaatag
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