Populus trichocarpa (black cottonwood): 7470010
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Entry
7470010 CDS
T01077
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B
KO
K03064
26S proteasome regulatory subunit T4
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
7470010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
7470010
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
7470010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
AAA_2
RuvB_N
AAA_22
nSTAND3
PRS7_OB
Prot_ATP_ID_OB_N
DUF815
AAA_7
TIP49
AAA_33
Parvo_NS1
AAA_14
RNA_helicase
Mg_chelatase
AAA_25
AAA_18
Sigma54_activat
Sec8_N
AAA_28
AAA_3
TsaE
AAA_24
IstB_IS21
AAA_lid_PRS2_C
NPHP3_N
NACHT
bpMoxR
ATPase
ABC_tran
AAA_11
ATPase_2
ResIII
PhoH
Etd1
AAA_30
NB-ARC
AAA_19
Motif
Other DBs
NCBI-GeneID:
7470010
NCBI-ProteinID:
XP_002306121
UniProt:
B9H0U4
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All DBs
Position
4:complement(17929137..17932867)
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AA seq
399 aa
AA seq
DB search
MSSEAEEAARRRTAIADYRKKLLNHKELESRVHAVRENLRAAKKEFAKTEDDLKSLQSVG
QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPRE
VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE
IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
LDRKIEIPLPNEQSRMEILKIHAAGIAKHGDIDYEAVVKLAEGFNGADLRNVCTEAGMSA
IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgaagcagaggaagcggcacgtcggcgtacagcgatcgccgattaccgcaag
aagctactgaatcataaggagctcgaatcccgagtccatgcagtgagagagaatttgcgg
gctgccaagaaggaatttgccaaaactgaagatgatttgaagtcccttcagagtgttgga
cagatcattggcgaagttctcaggcctctcgacaatgaacgcttgatagttaaagcaagc
agtggacctaggtatgtggttggttgtcgtagtaaagtggacaaagaaaaactaacagct
ggaacccgagttgttcttgatatgactactctcacaatcatgcgagctcttcctcgtgag
gttgatccagttgtatataacatgcttcatgaggatcctggtaatgttagctactctgct
gtgggagggctctcagatcagattcgagaattaagagaatctatagaactgcctctcatg
aatccagagctcttcttgagggtgggaatcaagcctcccaagggtgtgcttctttatgga
cctcctggaacaggaaagacattattagccagagcaatagctagcaacattgatgccaac
tttttgaaggttgtgtcgagtgccataattgataaatatattggtgaaagtgctagattg
attagagagatgtttgggtatgcacgggatcatcaaccatgtattatatttatggatgaa
attgatgccattggtggacgccgtttcagtgagggaacaagtgctgaccgtgaaatccaa
agaacactcatggagttgcttaatcagctggatggatttgaccagctagggaaggttaaa
atgattatggcaactaacagacctgatgttctggaccctgcacttcttcgaccgggccgt
ctagacaggaagatagaaattccattgccaaatgagcagtcaagaatggaaatcctcaaa
atccatgctgctggaattgccaaacatggagatattgactatgaagcagttgtaaagctt
gctgagggttttaatggtgctgatcttagaaatgtttgtactgaagctgggatgtctgca
atccgtgcagaacgtgattatgtcatccatgaggatttcatgaaggctgtcaggaaacta
aatgaggctaagaagcttgaatctagtgctcactacaatgctgactttggaaaggattga
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