KEGG   Populus trichocarpa (black cottonwood): 7470075
Entry
7470075           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7470075
  KO
K11138  telomere-associated protein RIF1
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pop03032]
    7470075
DNA replication proteins [BR:pop03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    7470075
SSDB
Motif
Pfam: Rif1_N XPC-binding LEM-3_GIY-YIG
Other DBs
NCBI-GeneID: 7470075
NCBI-ProteinID: XP_002325200
UniProt: B9IMU7
LinkDB
Position
18:complement(13742935..13748629)
AA seq 1124 aa
MSSFCNQIEEIKSLIYSNKSLAYSTLSHLQEQSVNDPSLLQTLADNSRDLVSLITVDISI
DDEEVAAQALKCSGFMIYHPSLVSTIPVDDANLVLEALAKVIMSTKIKSVCNLGVWCISM
QQFEASILVGCFNSVLQAVVHALDNPIGSLSTTFEAMQAVMKLAAQLSERMRESSHIWAP
PIFRRLLSTDKRERDISERCLLKIRPTIIPPPPALSKALAEDMKLKLLTVMKDLLNQGLK
IQTLQAWGWFIRLQGSHAMKYRHLTNDMLKVPEKTFSDHNPQVQIASLVAWEGLVDAFIH
PALLTSETNEPIKNGIQQVRTSGGSSCQIQASGFSKSIKLIMTPLIGIISSKCDVSVYSS
CLKTWCYLLHKLDISVNHPWVIELVLDPIFGAVFRFGPDVKTFWLWNLCLDLLDDFILAK
CRNLDHETSSQVSHHSTSSKWSWKLQPIKWLPWTIGQLDFLVKMMDIIISHASIATITPE
NRSSACDAALRIFRSFLKGVQMDFRSSSTKYNDIMLCLNTLLRFIKKICEDVTSEGGRSS
ELHHTSLQFLEAVVQDLEPSILGSPLYKVSLNFTCIHLQMVDNIRNVKYLGISSVAYMDM
VSPLVYLSVLYICVVIPSTPATRGMELLLQGLRRFFKTILLLYDPVENLSVAVGLLYKHM
EFRHLDIWTAIAKGLEDFFNGLTVKDLSLLKMDSNRDFPRAVCHLLSYPFVVCSCSWPTQ
KKDSGSLKESLVSPERKLKLQQVAEVWKSLYGALCASKFNKFSETSSLTEELCSMLNGCV
DQNISMLDHGTEQYFHRDDIGLTYLSGTAVTCVMEQQILTLAASSVGNNVEHARDPKTFS
GIKNSLEFSSRFLKLSWSMMEADPSTILFVTSRVFSVLVCFVRCLHTKPSILSFIETISC
PLLQWLSHRETQEASTNEQLHHLWSEILNCLRRCQPPIVFDSSLLKLQAPLLEKTLDHPK
STISELTVTFWNSTYGKQIKLDYPESLLDILDKLSRNKRINLQTKSLPFLVKCHSISEVT
AQRSRVTATNSRNSKRVELVEDTANQFEPENRLGSSSKRKRVGLTDHQKEVRRAQQGRGM
DCSGHGPGIRTYTSVDFSQGNEDSQESQEIRDPESILELLRRTA
NT seq 3375 nt   +upstreamnt  +downstreamnt
atgtcaagtttctgtaatcaaatagaagaaataaaatccctaatttattctaacaaatca
ctcgcttactctactctttcacacttacaagaacaatcagtaaatgatccttcattacta
caaaccctagctgacaattctcgagatttagtctctttgatcacagttgacatctcaatt
gatgatgaagaagttgctgcacaggctttaaagtgttcgggattcatgatttaccatcct
tctcttgtttctactattccagttgatgatgctaatttggttttggaggcattggctaaa
gtaattatgagcacaaagataaagtcggtttgtaatttaggagtttggtgtatatctatg
caacaatttgaagcatcaattctagttggctgtttcaattcagtgttgcaggcggttgtt
catgctcttgataatccgattggttctttgtctacgacatttgaggctatgcaggctgtg
atgaagttagcagctcagttaagtgagaggatgagagaatcttcacacatatgggctcct
ccaatatttaggagacttctcagcactgataagagagaaagggatatttcagaaaggtgt
ttactgaagattaggccgacaataattcctcctccccctgctctttccaaggcacttgcg
gaagatatgaaattgaaattacttactgtaatgaaggatcttctgaatcagggcttgaaa
attcaaacgttgcaagcatggggatggtttatccgcttacaaggatctcatgccatgaag
tataggcatttaactaatgacatgctgaaagttccagagaaaacattctcggatcacaat
ccacaagtccagattgcttcgctggttgcctgggaaggtcttgttgatgctttcattcac
cctgcactcttaacttctgagactaatgaacccattaagaatggtattcaacaagtgcga
acttctggtgggagtagttgtcaaattcaagcaagtggtttttcaaaaagcataaagctc
ataatgacacctctaattggtatcatctcgagtaaatgtgatgtatctgtttactcttca
tgcttgaagacatggtgttatctgctgcataagcttgatatctctgtcaaccatccatgg
gtgatagaactggtgttggatcccatttttggagctgtttttcggtttgggcctgatgtt
aagactttctggttgtggaacctgtgcctagatctgcttgacgattttattttagcaaaa
tgcaggaacctagaccatgaaaccagtagccaggtaagccatcattcaacatccagcaaa
tggtcatggaaactgcaacccattaaatggttgccctggactattggtcagctggatttc
cttgtaaagatgatggatattatcatcagccatgcatcaattgcaacaatcacccctgaa
aatagaagttcagcatgtgatgctgccttaaggatatttagatcttttttaaaaggggtc
caaatggattttagaagttcctccactaaatacaatgacattatgttgtgtttgaacaca
ttattaaggttcataaagaagatatgtgaagatgtaacttcagaaggtggcaggagtagt
gaattgcatcatacttccctccaatttctagaggctgttgttcaggacttagaaccttct
atattgggatcccctctttacaaggtgtctttaaacttcacatgcattcacctgcaaatg
gttgacaacattagaaatgtaaaatatctgggtatcagctctgttgcttacatggatatg
gtttcgccattggtttatctaagtgtactctatatctgtgtggtgatcccatcaactcct
gccactcgagggatggagctacttcttcagggacttcgcagatttttcaaaaccatactt
ttattgtatgatcctgtggaaaatctgtctgttgctgttggtttattgtataaacacatg
gagtttaggcacctagatatttggacagcgatagcaaaaggtttggaagatttcttcaat
ggtctaactgtaaaggatctttcacttttgaaaatggactccaacagggattttcctcgt
gctgtatgccacctcttatcctacccttttgtggtttgttcttgctcttggccaacccaa
aagaaagatagtggttccttgaaagaatctcttgtttcaccagaaagaaagcttaaactt
caacaagtagctgaagtgtggaaatcactgtatggagctctttgtgcctcgaagtttaat
aagttctctgaaacaagcagtttaactgaagagctttgttcaatgttaaatggttgtgtt
gatcaaaacatcagcatgcttgaccatggtactgagcaatattttcatcgtgatgatatt
ggcctcacttatttatctggcactgctgtgacatgtgtcatggaacaacagatcctaact
ttggcagcaagttcagttgggaacaatgtggaacatgctcgtgaccctaagacatttagt
ggcataaaaaatagcttggaattttcttccagattcttgaagctgtcatggtcaatgatg
gaagcagatccttccactattctctttgtaacttcaagggtcttttctgtgctagtatgt
tttgtcagatgccttcacaccaagccatctattctttcatttattgagacaataagttgt
ccactacttcagtggctgtcacatagagaaacacaggaggcaagcaccaatgaacaactt
caccacttgtggtccgaaatccttaattgcttaaggaggtgccaaccaccaatagtcttt
gattcctctctcctaaaacttcaggcaccacttcttgaaaaaactcttgatcacccaaaa
tccaccatttcagagcttaccgtcaccttttggaattcaacatatggtaagcagatcaag
ttagattaccccgagagtttacttgacatcttagacaagctttcaagaaataaaagaata
aacctccaaacaaaaagtctgccattcctggtaaaatgccattcaatatcagaagtaact
gctcagagatccagggtcactgcaacaaacagcaggaactctaaaagagtagagttagtg
gaggataccgcgaatcaatttgagccagaaaataggttgggttcaagttcaaaaagaaaa
agggtgggacttaccgaccaccagaaggaagtgagacgtgcacagcaaggaaggggaatg
gattgcagtggtcacggtccagggatccggacatacactagtgttgatttttcacaaggt
aatgaagattcacaagagagtcaggaaatccgggatcctgaatctatcttggagctgcta
agaagaactgcttaa

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