Populus trichocarpa (black cottonwood): 7470250
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Entry
7470250 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7470250
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
pop
Populus trichocarpa (black cottonwood)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
Tropomyosin
Rab11-FIP3
Shugoshin_N
Peptidase_S41
Motif
Other DBs
NCBI-GeneID:
7470250
NCBI-ProteinID:
XP_024455333
LinkDB
All DBs
Position
4:complement(4000334..4009589)
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AA seq
1070 aa
AA seq
DB search
MFKIFRGRDTTADSSPQSSYSPSSSSSLSPSPSSPPVTGPARPIRLVYYDEKGKFRMDSE
AVAALQLVKEPIGVVSVCGRSRQGKSFILNQLLGRSSGFQVASTHRPCTKGLWLWSAPLK
RTALDGTEYNLLLLDSEGIDAFDQTGTYSTQIFSLAVLLSSMFIYNQMGGIDEAALDRLS
LVTQMTKHIRVRASGGRSSASELGQFSPIFVWLLRDFYLDLVEDNKRITPRDYLELALRP
VQGSGKDIAAKNEIRDSIRALFPDRECFPLVRPLNNENDLQRMDQISLDKLRPEFRAGLD
ALTKFVFERTRPKQVGATVMTGPILVGITESYLEALNNGAVPTISSSWQSVEEAECRRAY
DTATEIYMSSFDRSKPPEEVFLRESHDEAVQKSLAAFNAAAVGIGSARKKYEGLLQKFFR
RALEDYKRNAFMEADLRCSNAIQNMEKRLRAACHASDANIDNIVKVLDGLLSEYETSCHG
PGKWQKLAMFLQQSLEGSILDLAKRLNDKIGSEKSSLMLRCHSMEDKMALLHKQLEASEK
DKSEYMKRYDEAINEKKKLADDYMRRINDLQSNRGSLDERCSSLVKALESAKQETSNWKR
KHDQVLSKQKADEEQAASEIAILKSRSSASEARLAAAHEQTRSAEEDAAEWKRKYDIAVR
ETKAALEKAANVQERTNKETQLREDALREEFSSHLVVKEDEIKEKNRRIEYAEQCLTALN
LELKAAESKMKSYGTEISSLKLEIKELVEKLETANTKAQSYDKEARILEQEKIHLEQRYQ
SEFERFAEVQERCNHAEKECKRATELADKARADAVSAQKEKNEFQKLAMERLAQIERAQR
HIESLDRQKNNLAGELERVRVSELDAVSKVSLLEARVEEREKEIESLLKSNNEERASTVK
ALQDLLEDERKAHSVANKRAEDFSLQLEVARAKLDALQQEFTSVRLNESALDNKLKAASH
GKRFRTDNVEMGGGSVQDAVTNDRRVNKRSRSTTSPVMFTQPEDGGSVFKGDDDDNQSQQ
TGQEDYKKFTAQKLRQELTKHNFGAELLQLRNNNKKDVLALYEKCVLRKS
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaatctttagaggaagagataccaccgccgactcctcaccgcagtcatcctac
tcgccttcgtcttcgtcctccttgtcgccgtccccgtcgtctcctcctgtcaccggaccg
gcgaggccgatccgacttgtttactatgatgagaaagggaagttccggatggattcagaa
gcggtggctgctctccagcttgttaaggaaccaatcggtgttgtttcggtttgcggtcgc
tctcgacagggaaaaagctttattttgaatcagcttcttggcaggagtagtggatttcaa
gtagcttccactcatcggccatgtaccaaaggactttggttatggagtgcgcctttaaag
agaactgctcttgatggaactgagtacaatcttttactgttagatagtgaaggcatagat
gcctttgatcaaacggggacatacagcactcagatattctccttagctgtcctactatcc
agtatgttcatttacaatcagatgggtggtatagatgaagcagcacttgatcgactctct
cttgtcactcaaatgaccaaacatattcgtgtcagagcttctggaggaaggagttcagct
tctgaacttggacagttctccccaatctttgtttggcttctaagggatttttatctagat
ttagtagaggataacaagagaataacaccccgtgactatctagagcttgctctaagacca
gttcagggaagtggaaaagatatagctgctaagaacgagattcgggactctattagagct
ctatttccagacagagaatgcttcccccttgtgcggcctttgaacaatgaaaatgatctc
cagcgtatggatcaaatatcgttagataaactaaggcctgaatttagagctgggctggat
gcattgacaaaatttgtttttgagagaacaaggcccaagcaagttggcgctactgtaatg
acaggcccaatccttgttggtattacagaatcttacctggaggctctcaataatggtgct
gtcccaacaatatcttcttcatggcagagtgttgaagaagctgagtgtaggcgagcatat
gacactgctacagaaatttatatgtcgagttttgaccgttcgaagccacctgaggaagtt
tttttgagagaatcacatgatgaagcggttcaaaaatcactggctgcatttaatgctgcc
gctgtggggattggttcagcaaggaagaagtacgaagggcttctccagaaattcttcaga
agagcattagaggattacaagaggaatgcttttatggaggcagacttgagatgttcaaat
gctatacaaaacatggaaaagagactgagagcagcctgtcacgcttctgatgccaacata
gataacattgtgaaagtccttgatggtcttctatctgaatatgagacatcttgtcatggc
ccagggaaatggcagaaattagcaatgttcctacaacaaagtttggaaggttcaatactt
gaccttgcaaagcggcttaatgataaaattggatccgagaagagttctcttatgctgaga
tgtcactcaatggaggataaaatggcattacttcacaagcagctagaagctagtgagaaa
gacaagtctgaatatatgaagcgctatgatgaagctattaatgaaaagaagaagcttgct
gatgactatatgaggcgcataaatgatttacaaagtaatcgcggctcattggatgagagg
tgttctagcttagtgaaagcattggaatctgccaagcaagaaacatcgaattggaaaaga
aaacatgatcaagtgttatcaaagcagaaagctgatgaagagcaggcagcttcagagatt
gcaatactcaagtcacggagcagtgcttctgaagcaaggttggctgcagctcatgaacaa
acaaggtcagctgaagaagatgcagcagagtggaaacggaagtatgacattgctgtaaga
gagacaaaagctgctctagagaaggcggcaaatgtgcaagaaagaactaataaagaaaca
caactgagggaagatgcactgcgggaagaattttctagccatttggttgttaaggaagat
gaaataaaggaaaagaacaggagaattgagtatgcggagcagtgtttgactgctttaaat
ttggagctaaaggctgctgagtcaaaaatgaagagttatggcactgaaatatcatccctg
aagcttgaaattaaagagttggttgagaagctagagactgcaaatactaaggcccaatct
tatgacaaagaagctaggattctggaacaagagaagatccatctggagcaaaggtatcaa
tctgagtttgagaggtttgcagaagtccaggaaaggtgtaatcatgctgaaaaagaatgt
aagagggctacggaattagctgataaagcaagagctgatgcagtatctgctcaaaaggaa
aaaaatgagtttcagaaattggcaatggaaagattagcccaaattgagagggctcagagg
catattgaaagtttggacagacagaaaaataatttggctggtgaacttgaaagagttcgt
gtgtcggagttggatgctgtctcgaaagtttcattactagaagctagagtagaagaaagg
gagaaagaaatagagtcacttttgaaatcaaacaatgaggagagggctagcacagttaaa
gcacttcaagatcttctggaagatgaacgtaaagcccacagtgttgcaaataagagagcc
gaagacttctctcttcagttggaagtggcacgggctaaactcgatgcccttcaacaggag
tttacttcagttcgtctgaatgaatcagcattggataataagcttaaggctgcttcccat
ggcaaacgatttagaactgataatgttgaaatgggtggaggatctgttcaagacgctgtc
acaaatgacaggagagtaaataagaggtctaggagtacaaccagccctgtaatgtttaca
cagccagaagatggtggttcagtgtttaagggggatgatgatgataatcagagtcagcaa
actggccaggaagattataaaaagtttactgctcagaagctaaggcaggaactcacaaaa
cacaattttggtgccgagctccttcagttgcgaaacaacaacaagaaagacgtccttgct
ttatatgagaaatgtgttcttcggaagtcatga
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