Populus trichocarpa (black cottonwood): 7470551
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Entry
7470551 CDS
T01077
Name
(RefSeq) pyridoxal 5'-phosphate synthase-like subunit PDX1.2
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00750
Vitamin B6 metabolism
pop01100
Metabolic pathways
pop01240
Biosynthesis of cofactors
Module
pop_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
7470551
Enzymes [BR:
pop01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
7470551
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
FMN_dh
NMO
Dus
His_biosynth
ThiI
IGPS
TMP-TENI
CAA_C
Motif
Other DBs
NCBI-GeneID:
7470551
NCBI-ProteinID:
XP_002299701
UniProt:
B9GFP4
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Position
1:complement(16079569..16080907)
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AA seq
305 aa
AA seq
DB search
MADDGAVTLYNNSALTDAKKNPFSIKAGLAQMLRGGAILEVSSVQQAKIAEEAGACSIMV
SEPGLRQGIRRMPDPSLIKEIKRAVSIPLMARARVGHFVEAQILEAIGVDYIDESELLAL
ADEDNFINKHNFRCPFICGCRNLGEALRRVREGAAMIRTQGEILGQGNVAETVKNVRNVM
KEVRVLNNMDEDEVFAFAKKIAAPYDLVAQIKQMGRLPVVQFAAGGIVTPADAALMMQLG
CDGIFVGSEVFDSADPYKRVRGIVEAVRHYNDPHVLVESSCGLEDSMAELNLSEDRIEQF
GRGGE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgatggagctgtgactctctacaataacagcgcccttacagatgccaagaag
aaccctttttccatcaaggctggtttagctcaaatgcttcgtggcggggccattctcgag
gtctccagcgtacagcaagcaaagattgcagaagaagctggtgcttgttctatcatggtt
tcagagccagggctacgccaaggaattcggcgaatgcctgacccatctcttatcaaggag
ataaaacgggcggtttcgattcctctaatggctcgtgctcgtgttggccattttgttgag
gcacagatactggaagctattggagttgattatattgatgagagtgagttgcttgcccta
gcagatgaggataattttattaacaagcataactttaggtgcccatttatttgtgggtgt
cgaaatctgggtgaagcgttaaggagagtgagagaaggcgcggcgatgataaggacacaa
ggggagatattaggccaaggtaatgttgctgagacagtgaagaatgtgagaaatgttatg
aaggaggtgagggttttgaacaatatggatgaggacgaggtttttgcgtttgcgaaaaag
attgctgcgccttatgatcttgtagcgcagattaagcagatgggaaggttgcctgttgtg
cagtttgctgcaggaggtattgtgacgcctgctgatgcggcactaatgatgcaattggga
tgtgatgggatttttgtgggaagcgaggtttttgactctgctgatccgtacaagagagtg
aggggcatagtggaggccgttaggcattataatgatcctcatgttttggttgagagcagc
tgtggattggaggattcaatggcagaacttaatcttagcgaggacaggattgaacagttt
ggtcgtggtggagagtag
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