Populus trichocarpa (black cottonwood): 7470683
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Entry
7470683 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7470683 isoform X1
KO
K00599
tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7470683
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
7470683
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_12
Methyltransf_25
Methyltransf_23
Methyltransf_31
Methyltransf_16
Methyltransf_11
MTS
Methyltransf_2
CMAS
TehB
PrmA
Methyltransf_9
Methyltransf_4
PCMT
DUF938
Anamorsin_N
Motif
Other DBs
NCBI-GeneID:
7470683
NCBI-ProteinID:
XP_002308544
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Position
6:23008328..23012883
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AA seq
557 aa
AA seq
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MESNVEQQSPSQKFQIYSTANTGVTPFWREKYERDAKKYWDVFYKRHQDKFFKDRHYLDK
EWGQYFAGEERRVVLEVGCGAGNTIFPLVATYPNIFVHACDFSPRAVNLVKTHKDYLERC
VGAFVCDLTVDDLSKEISPSSVDIVTMIFVLSAVSPEKMPLVLQNIKKVMKPNGYVLLRD
YAVGDLAQERLTSKDQQISENFYVRGDGTRAFYFSNEFLTSLFKDNGFDVEELGLCCKQV
ENRSREIVMNRRWIQAVFRFSDSSNYSVSKESAIKEALCQENVKSNVKESTSQCPSNNFE
IDMSEGVASEMFGISPSNDNEVIHVDLRDQNFKINVLSKEYQHTCKSTGLMLWESARMMA
MVLAVNPTIVEGRKVLELGCGCGGICSMVSAKSADLVVATDGDTKALELLSQNVASNLRQ
PSLAKLIMKRLVWGNTEHIEAIKDLNPGGFEVIIGTDVTYIPEAILPLFATAKELISCDR
NGGDQEPALILCHIFRRVDEPSLLSAASQYGFKLVDKWPLGIPSNPSQSIVGSWFPENGR
EEYIPNAALNIMYFHLQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaatccaatgtggaacagcaaagcccatctcagaaatttcaaatatactctactgct
aacactggtgtcactcccttctggagagaaaagtatgaaagggatgctaagaagtattgg
gatgttttttacaagcgacaccaagacaaattttttaaggaccgtcattacttggacaag
gaatggggtcaatattttgcaggcgaagaaagaagagttgttcttgaggttggctgtgga
gctgggaacaccatttttcctcttgttgctacctaccctaatatttttgtccatgcatgt
gatttctcaccgcgtgctgttaacttagttaagactcataaagactacttagagagatgt
gttggtgcattcgtatgcgatctgactgttgatgacttgagcaaagagatttctccatct
tcagttgatatcgtgacaatgatatttgtgttatctgcagtgtcccctgagaagatgcct
ctagtcctgcaaaacattaaaaaagtaatgaagcctaatggttatgtgctgcttcgtgac
tatgctgtaggggaccttgctcaggaaagattaactagcaaggatcaacagattagtgaa
aacttttatgtcaggggtgatggcactcgtgctttctatttttcaaatgaattcttgaca
agtttgtttaaagataatggatttgatgttgaagaacttggtttgtgctgcaagcaagtt
gagaatcggtcacgtgaaatagtgatgaataggcgttggatccaagctgtattccgattt
tcagacagctcaaactattctgttagcaaagaatctgcaatcaaggaagccctctgtcaa
gaaaatgtaaagtctaatgtcaaggaaagcacatcacagtgcccttcaaacaattttgag
atcgatatgtctgagggtgtggcatctgaaatgtttggaatttctccttccaatgataat
gaggtgattcacgttgacctcagggaccagaatttcaagattaatgttctgtcaaaagag
tatcagcatacttgtaaatcaacaggattgatgctctgggaatcagctcgtatgatggct
atggtgctagcagtaaatccaactattgttgaggggagaaaggtgttagagttggggtgt
ggctgtgggggtatatgctcaatggtttcagccaaatcagctgaccttgtagtggctact
gatggggacacaaaagcacttgaactgttgtcccagaatgttgcttctaaccttagacag
ccatcccttgcaaagctaattatgaagagattggtgtggggaaatacagaacatatagaa
gccatcaaggatctcaatcctggaggctttgaagtcataattggcacagatgttacatac
attcctgaagctattctgcccttgtttgccactgcaaaggaattaatttcatgtgacaga
aatggtggagaccaggaaccagctctaattctctgccatatctttcgccgagtcgatgaa
ccatcgttactttcagctgcatctcaatatggttttaagttggttgacaaatggccatta
ggaattccatctaatccatctcaaagcattgtaggctcttggttcccagagaatggtcgt
gaggagtacatcccaaatgcagcattgaacatcatgtacttccacttgcagtga
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